RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 LINC00473A8K010 186 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 NDUFS7O75251 213 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 IGLC2P0DOY2 106 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 IGLC3P0DOY3 106 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 PI3P19957 117 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 GNRHRP30968 328 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 CCKBRP32239 447 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 GALR1P47211 349 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 GPR12P47775 334 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 RPS15AP62244 130 aaKnown RBP5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 BTN3A2P78410 334 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 ZNF117Q03924 483 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 TMEM184AQ6ZMB5 413 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 C17orf78Q8N4C9 275 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 ZNF709Q8N972 641 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 ZNF740Q8NDX6 193 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 CMTM2Q8TAZ6 248 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 ZNF519Q8TB69 540 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 DNAJA3Q96EY1 480 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 FGF21Q9NSA1 209 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 CKLFQ9UBR5 152 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 TBL2Q9Y4P3 447 aaKnown RBP5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 IER3IP1Q9Y5U9 82 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 MUC22E2RYF6 1773 aaPredicted RBP5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 A0A1B0GV72 72 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 H3BSH0 61 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 PRRG2O14669 202 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 HRASP01112 189 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 IGF1P05019 195 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 NGFRP08138 427 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 SCGB1A1P11684 91 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 MPLP40238 635 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 ARHGAP11BQ3KRB8 267 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 EIPR1Q53HC9 387 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 LINC01590Q5TEZ4 76 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 C20orf196Q8IYI0 205 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 NECAP1Q8NC96 275 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 BAALCQ8WXS3 180 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 NMNAT3Q96T66 252 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 ATP5SQ99766 215 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 NUP210LQ5VU65 1888 aa5.67□□□□□ -1.5
TSPAN3-209ENST00000560715 LOC102724200A0A096LPH7 203 aaPredicted RBP5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 IGHV1-69-2A0A0G2JMI3 117 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 CTSDP07339 412 aaPredicted RBP5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 ATP6V0CP27449 155 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 NPBWR2P48146 333 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 PRLHRP49683 370 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 HINT1P49773 126 aaPredicted RBP5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 XGP55808 180 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 RAB38P57729 211 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 MSMPQ1L6U9 139 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 SPATA45Q537H7 98 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 SAMD13Q5VXD3 122 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 Q6ZSR3 168 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 NIT1Q86X76 327 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 ZNF547Q8IVP9 402 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 SLAMF6Q96DU3 332 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 C4orf45Q96LM5 186 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 ADOQ96SZ5 270 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 SSBP4Q9BWG4 385 aaPredicted RBP5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 NECAP2Q9NVZ3 263 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 FZR1Q9UM11 496 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 MRPS28Q9Y2Q9 187 aaKnown RBP5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 HEATR5AQ86XA9 2040 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 NSG1A0A0A6YYJ2 146 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 H7BYZ3 331 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 ESDP10768 282 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 RBMXP38159 391 aaKnown RBP5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 ZNF266Q14584 549 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 C5orf47Q569G3 176 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 ZNF562Q6V9R5 426 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 ZNF761Q86XN6 746 aaPredicted RBP5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 C1orf174Q8IYL3 243 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 SAXO1Q8IYX7 474 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 CHST4Q8NCG5 386 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 OR2T10Q8NGZ9 312 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 AIF1LQ9BQI0 150 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 TIMM29Q9BSF4 260 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 LPAR5Q9H1C0 372 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 ANAPC10Q9UM13 185 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 R4GN57 208 aa5.66□□□□□ -1.5
TSPAN3-209ENST00000560715 TRAV1-1A0A0B4J248 108 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 MSTNO14793 375 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 TNFSF15O95150 251 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 NDUFB2O95178 105 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 IGFBP3P17936 291 aaPredicted RBP5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 SFTPDP35247 375 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 SLC17A1Q14916 467 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 PSG3Q16557 428 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 WDR38Q5JTN6 314 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 DUX4L9Q6RFH8 374 aaPredicted RBP5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 LHFPL1Q86WI0 220 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 OR5AU1Q8NGC0 362 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 ZPLD1Q8TCW7 415 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 C11orf40Q8WZ69 217 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 P2RX4Q99571 388 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 HSPB9Q9BQS6 159 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 APOOQ9BUR5 198 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 MANBALQ9NQG1 85 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 NAT8Q9UHE5 227 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms