RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 P2RX4Q99571 388 aa13.8□□□□□ -0.2
SMAD3-210ENST00000559092 MCRIP2Q9BUT9 160 aaKnown RBP13.8□□□□□ -0.2
SMAD3-210ENST00000559092 OR51J1Q9H342 316 aa13.8□□□□□ -0.2
SMAD3-210ENST00000559092 RDH8Q9NYR8 311 aa13.8□□□□□ -0.2
SMAD3-210ENST00000559092 ZNF221Q9UK13 617 aa13.8□□□□□ -0.2
SMAD3-210ENST00000559092 SSR3Q9UNL2 185 aa13.8□□□□□ -0.2
SMAD3-210ENST00000559092 WASHC3Q9Y3C0 194 aa13.8□□□□□ -0.2
SMAD3-210ENST00000559092 PRB2P02812 416 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-210ENST00000559092 RPLP1P05386 114 aaKnown RBP13.79□□□□□ -0.2
SMAD3-210ENST00000559092 FCGR3AP08637 254 aa13.79□□□□□ -0.2
SMAD3-210ENST00000559092 GNB3P16520 340 aa13.79□□□□□ -0.2
SMAD3-210ENST00000559092 CNTFRP26992 372 aa13.79□□□□□ -0.2
SMAD3-210ENST00000559092 PSMB8P28062 276 aa13.79□□□□□ -0.2
SMAD3-210ENST00000559092 Q6ZS49 121 aa13.79□□□□□ -0.2
SMAD3-210ENST00000559092 C18orf65Q6ZTR6 163 aa13.79□□□□□ -0.2
SMAD3-210ENST00000559092 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-210ENST00000559092 RNF150Q9ULK6 438 aa13.79□□□□□ -0.2
SMAD3-210ENST00000559092 GAB2Q9UQC2 676 aa13.79□□□□□ -0.2
SMAD3-210ENST00000559092 IGHV7-81A0A0B4J1V7 117 aa13.78□□□□□ -0.2
SMAD3-210ENST00000559092 PROP1O75360 226 aa13.78□□□□□ -0.2
SMAD3-210ENST00000559092 GSTP1P09211 210 aaKnown RBP13.78□□□□□ -0.2
SMAD3-210ENST00000559092 PPIFP30405 207 aaKnown RBP13.78□□□□□ -0.2
SMAD3-210ENST00000559092 TALDO1P37837 337 aa13.78□□□□□ -0.2
SMAD3-210ENST00000559092 ZNF660Q6AZW8 331 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-210ENST00000559092 OR8U1Q8NH10 309 aa13.78□□□□□ -0.2
SMAD3-210ENST00000559092 OR10J5Q8NHC4 309 aa13.78□□□□□ -0.2
SMAD3-210ENST00000559092 CABLES2Q9BTV7 478 aa13.78□□□□□ -0.2
SMAD3-210ENST00000559092 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.78□□□□□ -0.22e-6■■■■■ 41.6
SMAD3-210ENST00000559092 AURKAIP1Q9NWT8 199 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-210ENST00000559092 TRBV6-7A0A0A0MS04 114 aa13.77□□□□□ -0.21
SMAD3-210ENST00000559092 A0A0B4J203 849 aa13.77□□□□□ -0.21
SMAD3-210ENST00000559092 H7C2Y5 167 aa13.77□□□□□ -0.21
SMAD3-210ENST00000559092 CCL24O00175 119 aa13.77□□□□□ -0.21
SMAD3-210ENST00000559092 RRHO14718 337 aa13.77□□□□□ -0.21
SMAD3-210ENST00000559092 TFAP2AP05549 437 aa13.77□□□□□ -0.21
SMAD3-210ENST00000559092 GSTT2P0CG29 244 aa13.77□□□□□ -0.21
SMAD3-210ENST00000559092 GSTT2BP0CG30 244 aa13.77□□□□□ -0.21
SMAD3-210ENST00000559092 KCTD21Q4G0X4 260 aa13.77□□□□□ -0.21
SMAD3-210ENST00000559092 GLDNQ6ZMI3 551 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-210ENST00000559092 RAX2Q96IS3 184 aa13.77□□□□□ -0.21
SMAD3-210ENST00000559092 ATG5Q9H1Y0 275 aa13.77□□□□□ -0.21
SMAD3-210ENST00000559092 TRAV41A0A0B4J266 112 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 BET1O15155 118 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 ATP6V0E1O15342 81 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 SCGNO76038 276 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 IGLV1-40P01703 118 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 DTYMKP23919 212 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 EGFEM1PQ0D2K5 195 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 ARFRP1Q13795 201 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 IGSF11Q5DX21 431 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 TMEM65Q6PI78 240 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 PDPNQ86YL7 162 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 MINDY2Q8NBR6 621 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 MRAPQ8TCY5 172 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 MYOZ3Q8TDC0 251 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 C4orf3Q8WVX3 66 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 TSNAXQ99598 290 aaKnown RBP13.76□□□□□ -0.21
SMAD3-210ENST00000559092 PARP11Q9NR21 331 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 ZMAT5Q9UDW3 170 aaKnown RBP13.76□□□□□ -0.21
SMAD3-210ENST00000559092 WSB1Q9Y6I7 421 aa13.76□□□□□ -0.21
SMAD3-210ENST00000559092 A0A075B6Q4 140 aa13.75□□□□□ -0.21
SMAD3-210ENST00000559092 G3V318 75 aa13.75□□□□□ -0.21
SMAD3-210ENST00000559092 SPDEFO95238 335 aa13.75□□□□□ -0.21
SMAD3-210ENST00000559092 CRIP2P52943 208 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-210ENST00000559092 CX3CL1P78423 397 aa13.75□□□□□ -0.21
SMAD3-210ENST00000559092 TAGLNQ01995 201 aaKnown RBP13.75□□□□□ -0.21
SMAD3-210ENST00000559092 PLGLAQ15195 96 aa13.75□□□□□ -0.21
SMAD3-210ENST00000559092 CDNFQ49AH0 187 aa13.75□□□□□ -0.21
SMAD3-210ENST00000559092 LCNL1Q6ZST4 164 aa13.75□□□□□ -0.21
SMAD3-210ENST00000559092 TCTEX1D1Q8N7M0 179 aa13.75□□□□□ -0.21
SMAD3-210ENST00000559092 ZNF383Q8NA42 475 aa13.75□□□□□ -0.21
SMAD3-210ENST00000559092 DRAXINQ8NBI3 349 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-210ENST00000559092 DPF1Q92782 380 aa13.75□□□□□ -0.21
SMAD3-210ENST00000559092 UBE2E2Q96LR5 201 aa13.75□□□□□ -0.21
SMAD3-210ENST00000559092 OR51E2Q9H255 320 aa13.75□□□□□ -0.21
SMAD3-210ENST00000559092 FBXL15Q9H469 300 aa13.75□□□□□ -0.21
SMAD3-210ENST00000559092 ZNF230Q9UIE0 474 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-210ENST00000559092 SMIM30A4D0T7 59 aa13.74□□□□□ -0.21
SMAD3-210ENST00000559092 M0R1X1 148 aa13.74□□□□□ -0.21
SMAD3-210ENST00000559092 APOA2P02652 100 aa13.74□□□□□ -0.21
SMAD3-210ENST00000559092 IGKV1-16P04430 117 aa13.74□□□□□ -0.21
SMAD3-210ENST00000559092 OR8U9P0C7N5 309 aa13.74□□□□□ -0.21
SMAD3-210ENST00000559092 SDC2P34741 201 aa13.74□□□□□ -0.21
SMAD3-210ENST00000559092 SCAND1P57086 179 aa13.74□□□□□ -0.21
SMAD3-210ENST00000559092 PITPNAQ00169 270 aa13.74□□□□□ -0.21
SMAD3-210ENST00000559092 TMEM267Q0VDI3 215 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-210ENST00000559092 HACD4Q5VWC8 232 aa13.74□□□□□ -0.21
SMAD3-210ENST00000559092 SFXN4Q6P4A7 337 aa13.74□□□□□ -0.21
SMAD3-210ENST00000559092 ZNF562Q6V9R5 426 aa13.74□□□□□ -0.21
SMAD3-210ENST00000559092 FLYWCH2Q96CP2 140 aaKnown RBP13.74□□□□□ -0.21
SMAD3-210ENST00000559092 DCSTAMPQ9H295 470 aa13.74□□□□□ -0.21
SMAD3-210ENST00000559092 DAPK2Q9UIK4 370 aa13.74□□□□□ -0.21
SMAD3-210ENST00000559092 VSIG4Q9Y279 399 aa13.74□□□□□ -0.21
SMAD3-210ENST00000559092 RRP15Q9Y3B9 282 aaKnown RBP13.74□□□□□ -0.21
SMAD3-210ENST00000559092 FCN1O00602 326 aa13.73□□□□□ -0.21
SMAD3-210ENST00000559092 RAB9AP51151 201 aa13.73□□□□□ -0.21
SMAD3-210ENST00000559092 RPS16P62249 146 aaKnown RBP13.73□□□□□ -0.21
SMAD3-210ENST00000559092 RUNX1Q01196 453 aa13.73□□□□□ -0.21
SMAD3-210ENST00000559092 KIAA0141Q14154 515 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-210ENST00000559092 PSG5Q15238 335 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 733 ms