RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 CTSZQ9UBR2 303 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 PKDREJQ9NTG1 2253 aa11.37□□□□□ -0.59
TPM1-215ENST00000558868 A0A1B0GU03 582 aa11.37□□□□□ -0.59
TPM1-215ENST00000558868 MEX3AA1L020 520 aaKnown RBP11.37□□□□□ -0.59
TPM1-215ENST00000558868 LYNX1G3V0Z9 82 aa11.37□□□□□ -0.59
TPM1-215ENST00000558868 ST8SIA3O43173 380 aa11.37□□□□□ -0.59
TPM1-215ENST00000558868 PPIHO43447 177 aaKnown RBP11.37□□□□□ -0.59
TPM1-215ENST00000558868 F12P00748 615 aaPredicted RBP11.37□□□□□ -0.59
TPM1-215ENST00000558868 LYNX1P0DP58 116 aa11.37□□□□□ -0.59
TPM1-215ENST00000558868 NFYBP25208 207 aa11.37□□□□□ -0.59
TPM1-215ENST00000558868 KIR2DS2P43631 304 aa11.37□□□□□ -0.59
TPM1-215ENST00000558868 NMSQ5H8A3 153 aa11.37□□□□□ -0.59
TPM1-215ENST00000558868 OR8H1Q8NGG4 311 aa11.37□□□□□ -0.59
TPM1-215ENST00000558868 RRNAD1Q96FB5 475 aaKnown RBP11.37□□□□□ -0.59
TPM1-215ENST00000558868 NEIL1Q96FI4 390 aaPredicted RBP11.37□□□□□ -0.59
TPM1-215ENST00000558868 GPHA2Q96T91 129 aa11.37□□□□□ -0.59
TPM1-215ENST00000558868 PRELID3BQ9Y3B1 194 aa11.37□□□□□ -0.59
TPM1-215ENST00000558868 FBN3Q75N90 2809 aa11.37□□□□□ -0.59
TPM1-215ENST00000558868 KANTRA0A1W2PQU2 76 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 E5RGE8 158 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 RAB29O14966 203 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 DEDDO75618 318 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 SCGB1D2O95969 90 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 IFNA7P01567 189 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 PVALBP20472 110 aaPredicted RBP11.36□□□□□ -0.59
TPM1-215ENST00000558868 OMGP23515 440 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 LPAR6P43657 344 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 EFNA4P52798 201 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 ZNF273Q14593 569 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 NDUFA5Q16718 116 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 PRAMEF5Q5TYX0 476 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 FAM53AQ6NSI3 398 aaPredicted RBP11.36□□□□□ -0.59
TPM1-215ENST00000558868 FAM219AQ8IW50 185 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 C8orf31Q8N9H6 132 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 OR4D5Q8NGN0 318 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 ADTRPQ96IZ2 230 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 IFI27L2Q9H2X8 130 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 PLEKHA2Q9HB19 425 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 ITGB1BP2Q9UKP3 347 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 NSG2Q9Y328 171 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 LSM5Q9Y4Y9 91 aaKnown RBP11.36□□□□□ -0.59
TPM1-215ENST00000558868 POMT1Q9Y6A1 747 aa11.36□□□□□ -0.59
TPM1-215ENST00000558868 A0A1W2PPR1 153 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 H0YIZ8 118 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 M0R1X1 148 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 BCL2L11O43521 198 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 MBPP02686 304 aaPredicted RBP11.35□□□□□ -0.59
TPM1-215ENST00000558868 NKX2-1P43699 371 aaPredicted RBP11.35□□□□□ -0.59
TPM1-215ENST00000558868 AKR1C2P52895 323 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 AP2S1P53680 142 aaPredicted RBP11.35□□□□□ -0.59
TPM1-215ENST00000558868 ZNF585BQ52M93 769 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 CT45A1Q5HYN5 189 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 AVPI1Q5T686 147 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 TEX261Q6UWH6 196 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 SLC51BQ86UW2 128 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 SPAG16Q8N0X2 631 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 FGFRL1Q8N441 504 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 ZNF439Q8NDP4 499 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 OR1S1Q8NH92 325 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 CT45A3Q8NHU0 189 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 AQP10Q96PS8 301 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 S1PR3Q99500 378 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 HEXA-AS1Q9H8Q6 139 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 OR5AC2Q9NZP5 309 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 U3KQ87 197 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 DSCAML1Q8TD84 2053 aa11.35□□□□□ -0.59
TPM1-215ENST00000558868 hCG_1809904A0A1W2PP81 198 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 A0A1W2PPE2 198 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 A0A1W2PR64 198 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 A0A1W2PRV1 198 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 RNF222A6NCQ9 220 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 K7EPK0 472 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 RBFOX2O43251 390 aaKnown RBP eCLIP11.34□□□□□ -0.59
TPM1-215ENST00000558868 RBP4P02753 201 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 MMP9P14780 707 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 DUTP33316 252 aaKnown RBP11.34□□□□□ -0.59
TPM1-215ENST00000558868 GPR6P46095 362 aaPredicted RBP11.34□□□□□ -0.59
TPM1-215ENST00000558868 THBS3P49746 956 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 UBA52P62987 128 aaKnown RBP11.34□□□□□ -0.59
TPM1-215ENST00000558868 BTNL3Q6UXE8 466 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 SLC25A48Q6ZT89 311 aaKnown RBP11.34□□□□□ -0.59
TPM1-215ENST00000558868 FOXRED2Q8IWF2 684 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 FAM71E2Q8N5Q1 922 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 GPR146Q96CH1 333 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 C5orf30Q96GV9 206 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 ARPC5LQ9BPX5 153 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 ZC4H2Q9NQZ6 224 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 MMP24Q9Y5R2 645 aa11.34□□□□□ -0.59
TPM1-215ENST00000558868 SPTBN1Q01082 2364 aaKnown RBP11.33□□□□□ -0.6
TPM1-215ENST00000558868 UTP20O75691 2785 aaKnown RBP11.33□□□□□ -0.6
TPM1-215ENST00000558868 WRBO00258 174 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 FCN3O75636 299 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 IGKV1-39P01597 117 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 IGKV1D-39P04432 117 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 CCL3L1P16619 93 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 CDKN1AP38936 164 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 P2RY1P47900 373 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 ARHGDIBP52566 201 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 ZNF134P52741 427 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 RPL30P62888 115 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms