RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 PRR13Q9NZ81 148 aa8.54□□□□□ -1.04
TPM1-212ENST00000558347 BORCS7-ASMTA0A0B4J1R7 106 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 NDUFA2O43678 99 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 ANGPTL7O43827 346 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 GPR137BO60478 399 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 MED6O75586 246 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 PLATP00750 562 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 GLAP06280 429 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 DUSP1P28562 367 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 RBM11P57052 281 aaKnown RBP8.53□□□□□ -1.04
TPM1-212ENST00000558347 ZNF154Q13106 437 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 HAGHLQ6PII5 290 aaPredicted RBP8.53□□□□□ -1.04
TPM1-212ENST00000558347 MOGAT3Q86VF5 341 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 LDLRAD3Q86YD5 345 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 SCCPDHQ8NBX0 429 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 ABHD14BQ96IU4 210 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 CYYR1Q96J86 154 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 NRIP2Q9BQI9 281 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 OR2S2Q9NQN1 319 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 MTCH1Q9NZJ7 389 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 RCC2Q9P258 522 aaKnown RBP8.53□□□□□ -1.04
TPM1-212ENST00000558347 FBXL17Q9UF56 701 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 POLDIP2Q9Y2S7 368 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 PRELID3BQ9Y3B1 194 aa8.53□□□□□ -1.04
TPM1-212ENST00000558347 WNK2Q9Y3S1 2297 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 TRAPPC2LH3BP13 241 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 H7C2Y5 167 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 GPR31O00270 319 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 NUPL2O15504 423 aaKnown RBP8.52□□□□□ -1.05
TPM1-212ENST00000558347 SYNGR1O43759 233 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 FBXO24O75426 580 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 VENTXO95231 258 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 CD5P06127 495 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 SEC11BP0C7V7 166 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 FUT3P21217 361 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 LPAR6P43657 344 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 P2RY1P47900 373 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 RAB5CP51148 216 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 ERVK11-1P61568 191 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 HERV-K104P61576 105 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 RND3P61587 244 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 GUCA2BQ16661 112 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 FAM201AQ5SY85 155 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 PRAMEF6Q5VXH4 476 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 C11orf53Q8IXP5 236 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 Q8IYB0 196 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 RTN4IP1Q8WWV3 396 aaPredicted RBP8.52□□□□□ -1.05
TPM1-212ENST00000558347 SLAMF9Q96A28 289 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 FAM212BQ9NTI7 297 aaPredicted RBP8.52□□□□□ -1.05
TPM1-212ENST00000558347 ST3GAL6Q9Y274 331 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 TMED3Q9Y3Q3 217 aa8.52□□□□□ -1.05
TPM1-212ENST00000558347 PIGBOS1A0A0B4J2F0 54 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 DUXBA0A1W2PPF3 345 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 RNASEK-C17orf49H0YIS7 233 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 J3QLI3 93 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 GEMIN2O14893 280 aaKnown RBP8.51□□□□□ -1.05
TPM1-212ENST00000558347 FOXH1O75593 365 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 MBPP02686 304 aaPredicted RBP8.51□□□□□ -1.05
TPM1-212ENST00000558347 PGA5P0DJD9 388 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 PVALBP20472 110 aaPredicted RBP8.51□□□□□ -1.05
TPM1-212ENST00000558347 EPHA1P21709 976 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 GATA3P23771 443 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 PAX6P26367 422 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 CFHR2P36980 270 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 MDH2P40926 338 aaKnown RBP8.51□□□□□ -1.05
TPM1-212ENST00000558347 GATA4P43694 442 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 NPBWR2P48146 333 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 FGF12P61328 243 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 HOXA4Q00056 320 aaPredicted RBP8.51□□□□□ -1.05
TPM1-212ENST00000558347 BOLLQ8N9W6 283 aaKnown RBP8.51□□□□□ -1.05
TPM1-212ENST00000558347 DEFB108BQ8NET1 73 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 OR10Z1Q8NGY1 313 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 GINS3Q9BRX5 216 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 HRH4Q9H3N8 390 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 C7orf69Q9H7B7 122 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 SLC2A9Q9NRM0 540 aa8.51□□□□□ -1.05
TPM1-212ENST00000558347 POLR3KQ9Y2Y1 108 aaPredicted RBP8.51□□□□□ -1.05
TPM1-212ENST00000558347 STRAPQ9Y3F4 350 aaKnown RBP8.51□□□□□ -1.05
TPM1-212ENST00000558347 LSM5Q9Y4Y9 91 aaKnown RBP8.51□□□□□ -1.05
TPM1-212ENST00000558347 PPIAL4EA0A075B759 164 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 PPIAL4CA0A0B4J2A2 164 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 PPIAL4DF5H284 164 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 IFNL4K9M1U5 179 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 SIGLEC5O15389 551 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 RHBDL1O75783 438 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 CDS2O95674 445 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 FSHBP01225 129 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 GRPP07492 148 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 OR5AC1P0C628 307 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 PPIAL4FP0DN26 164 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 MUC1P15941 1255 aaPredicted RBP8.5□□□□□ -1.05
TPM1-212ENST00000558347 BCL3P20749 454 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 PIGYQ3MUY2 71 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 LINC00596Q86U02 117 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 Q8TCH9 128 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 TOMM40LQ969M1 308 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 ERGIC1Q969X5 290 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 SPIN2AQ99865 258 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 SPIN2BQ9BPZ2 258 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 UFSP2Q9NUQ7 469 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms