RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 TGIF2LXQ8IUE1 241 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 CMTM1Q8IZ96 169 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 OR8H3Q8N146 312 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 TOMM40LQ969M1 308 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 ZNF486Q96H40 463 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-221ENST00000555773 ZNF251Q9BRH9 671 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 RSRP1Q9BUV0 290 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 PRDM13Q9H4Q3 707 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 CCL28Q9NRJ3 127 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 SDHAF2Q9NX18 166 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 TBC1D24Q9ULP9 559 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 ANK3Q12955 4377 aaKnown RBP10.08□□□□□ -0.8
SHMT2-221ENST00000555773 A0A0U1RQK1 487 aa10.08□□□□□ -0.8
SHMT2-221ENST00000555773 GPR31O00270 319 aa10.08□□□□□ -0.8
SHMT2-221ENST00000555773 HSD17B6O14756 317 aa10.08□□□□□ -0.8
SHMT2-221ENST00000555773 PROP1O75360 226 aa10.08□□□□□ -0.8
SHMT2-221ENST00000555773 IGLV2-14P01704 120 aa10.08□□□□□ -0.8
SHMT2-221ENST00000555773 PGAM2P15259 253 aa10.08□□□□□ -0.8
SHMT2-221ENST00000555773 TAGLNQ01995 201 aaKnown RBP10.08□□□□□ -0.8
SHMT2-221ENST00000555773 DCTN2Q13561 401 aaKnown RBP10.08□□□□□ -0.8
SHMT2-221ENST00000555773 AANATQ16613 207 aa10.08□□□□□ -0.8
SHMT2-221ENST00000555773 ZNF66Q6ZN08 573 aa10.08□□□□□ -0.8
SHMT2-221ENST00000555773 DRAM1Q8N682 238 aa10.08□□□□□ -0.8
SHMT2-221ENST00000555773 BVESQ8NE79 360 aa10.08□□□□□ -0.8
SHMT2-221ENST00000555773 OR13C8Q8NGS7 320 aa10.08□□□□□ -0.8
SHMT2-221ENST00000555773 RTN4IP1Q8WWV3 396 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-221ENST00000555773 ADTRPQ96IZ2 230 aa10.08□□□□□ -0.8
SHMT2-221ENST00000555773 COPZ2Q9P299 210 aa10.08□□□□□ -0.8
SHMT2-221ENST00000555773 GPR132Q9UNW8 380 aa10.08□□□□□ -0.8
SHMT2-221ENST00000555773 HILPDAQ9Y5L2 63 aa10.08□□□□□ -0.8
SHMT2-221ENST00000555773 IGHV1-3A0A0C4DH29 117 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 VGLL3A8MV65 326 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 INAFM1C9JVW0 142 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 M0R1X1 148 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 NDUFB6O95139 128 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 CTSDP07339 412 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-221ENST00000555773 SRD5A1P18405 259 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 SLC6A1P30531 599 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 BRS3P32247 399 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 MC5RP33032 325 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 DYNLT3P51808 116 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 RBMS2Q15434 407 aaKnown RBP10.07□□□□□ -0.8
SHMT2-221ENST00000555773 TUSC1Q2TAM9 212 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 RPL39P5Q59GN2 51 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 ZNF818PQ6ZRF7 136 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 IL17RELQ6ZVW7 336 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 Q71RC1 249 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-221ENST00000555773 BCL6BQ8N143 479 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-221ENST00000555773 ZDHHC22Q8N966 263 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 POC5Q8NA72 575 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 MARCH1Q8TCQ1 289 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 C17orf50Q8WW18 174 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 MRGPRFQ96AM1 343 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 HSD17B10Q99714 261 aaKnown RBP10.07□□□□□ -0.8
SHMT2-221ENST00000555773 FXYD6Q9H0Q3 95 aa10.07□□□□□ -0.8
SHMT2-221ENST00000555773 SVEP1Q4LDE5 3571 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 FAM240BA0A1B0GVZ2 78 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 CRLF1O75462 422 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 PGLYRP1O75594 196 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-221ENST00000555773 CT45A6P0DMU7 189 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 CT45A5P0DMU8 189 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 CT45A7P0DMV0 189 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 CD1BP29016 333 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 DUTP33316 252 aaKnown RBP10.06□□□□□ -0.8
SHMT2-221ENST00000555773 BTCP35070 178 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 THBS3P49746 956 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 CCR6P51684 374 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 RND3P61587 244 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 DIAPH2-AS1Q14236 149 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 HABP2Q14520 560 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-221ENST00000555773 DEFB112Q30KQ8 113 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 ABCA11PQ4W5N1 156 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 MOB3BQ86TA1 216 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 THNSL2Q86YJ6 484 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 DYNAPQ8N1N2 210 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 OR5AN1Q8NGI8 311 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 NABP2Q9BQ15 211 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 DPAGT1Q9H3H5 408 aa10.06□□□□□ -0.8
SHMT2-221ENST00000555773 C14orf166Q9Y224 244 aaKnown RBP10.06□□□□□ -0.8
SHMT2-221ENST00000555773 A0A1W2PPI3 338 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 FAM90A9PA6NNJ1 464 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 RNF212BA8MTL3 300 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 TCRBP04435 133 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 FAM157CP0CG43 387 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 RRASP10301 218 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 REG1BP48304 166 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 CATR1Q13166 79 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 EIF4EBP1Q13541 118 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-221ENST00000555773 RBMS3Q6XE24 437 aaKnown RBP10.05□□□□□ -0.8
SHMT2-221ENST00000555773 Q6YL49 198 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 KCTD9Q7L273 389 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 TCTEX1D1Q8N7M0 179 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 CCDC71LQ8N9Z2 235 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 DUSP18Q8NEJ0 188 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 C22orf15Q8WYQ4 148 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 ZDHHC16Q969W1 377 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 C5orf30Q96GV9 206 aa10.05□□□□□ -0.8
SHMT2-221ENST00000555773 RTBDNQ9BSG5 229 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-221ENST00000555773 MRPL20Q9BYC9 149 aaKnown RBP10.05□□□□□ -0.8
SHMT2-221ENST00000555773 PRELID3BQ9Y3B1 194 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms