RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 TSNAXQ99598 290 aaKnown RBP18.52■□□□□ 0.56
FOXA1-204ENST00000554607 FAAP24Q9BTP7 215 aa18.52■□□□□ 0.56
FOXA1-204ENST00000554607 JTBO76095 146 aa18.51■□□□□ 0.55
FOXA1-204ENST00000554607 SPDEFO95238 335 aa18.51■□□□□ 0.55
FOXA1-204ENST00000554607 KLF5Q13887 457 aaPredicted RBP18.51■□□□□ 0.55
FOXA1-204ENST00000554607 ZNF485Q8NCK3 441 aa18.51■□□□□ 0.55
FOXA1-204ENST00000554607 IL17DQ8TAD2 202 aa18.51■□□□□ 0.55
FOXA1-204ENST00000554607 TUBA4BQ9H853 241 aa18.51■□□□□ 0.55
FOXA1-204ENST00000554607 CHMP1AQ9HD42 196 aaPredicted RBP18.51■□□□□ 0.55
FOXA1-204ENST00000554607 HYDINQ4G0P3 5121 aa18.51■□□□□ 0.55
FOXA1-204ENST00000554607 CPEP16870 476 aa18.5■□□□□ 0.55
FOXA1-204ENST00000554607 MAPK3P27361 379 aaPredicted RBP18.5■□□□□ 0.55
FOXA1-204ENST00000554607 ZNF880Q6PDB4 577 aa18.5■□□□□ 0.55
FOXA1-204ENST00000554607 MOB1BQ7L9L4 216 aa18.5■□□□□ 0.55
FOXA1-204ENST00000554607 GTSCR1Q86UQ5 136 aa18.5■□□□□ 0.55
FOXA1-204ENST00000554607 SVOPQ8N4V2 548 aa18.5■□□□□ 0.55
FOXA1-204ENST00000554607 POC5Q8NA72 575 aa18.5■□□□□ 0.55
FOXA1-204ENST00000554607 OR9G4Q8NGQ1 327 aa18.5■□□□□ 0.55
FOXA1-204ENST00000554607 EDARADDQ8WWZ3 215 aa18.5■□□□□ 0.55
FOXA1-204ENST00000554607 ABHD14BQ96IU4 210 aa18.5■□□□□ 0.55
FOXA1-204ENST00000554607 TNCP24821 2201 aa18.5■□□□□ 0.55
FOXA1-204ENST00000554607 PNMA8CA0A1B0GUJ8 204 aa18.49■□□□□ 0.55
FOXA1-204ENST00000554607 NAPSAO96009 420 aa18.49■□□□□ 0.55
FOXA1-204ENST00000554607 CD1AP06126 327 aa18.49■□□□□ 0.55
FOXA1-204ENST00000554607 FXYD3Q14802 87 aa18.49■□□□□ 0.55
FOXA1-204ENST00000554607 C6orf201Q7Z4U5 140 aa18.49■□□□□ 0.55
FOXA1-204ENST00000554607 SETD6Q8TBK2 473 aa18.49■□□□□ 0.55
FOXA1-204ENST00000554607 AGMATQ9BSE5 352 aa18.49■□□□□ 0.55
FOXA1-204ENST00000554607 RIMS4Q9H426 269 aaPredicted RBP18.49■□□□□ 0.55
FOXA1-204ENST00000554607 SMPD3Q9NY59 655 aaPredicted RBP18.49■□□□□ 0.55
FOXA1-204ENST00000554607 RPS16P62249 146 aaKnown RBP18.48■□□□□ 0.55
FOXA1-204ENST00000554607 RPS27AP62979 156 aaKnown RBP18.48■□□□□ 0.55
FOXA1-204ENST00000554607 TATDN3Q17R31 274 aa18.48■□□□□ 0.55
FOXA1-204ENST00000554607 GRPEL2Q8TAA5 225 aa18.48■□□□□ 0.55
FOXA1-204ENST00000554607 TMED9Q9BVK6 235 aa18.48■□□□□ 0.55
FOXA1-204ENST00000554607 TMEM59Q9BXS4 323 aa18.48■□□□□ 0.55
FOXA1-204ENST00000554607 FAM53CQ9NYF3 392 aa18.48■□□□□ 0.55
FOXA1-204ENST00000554607 ANKRD34BA5PLL1 514 aa18.47■□□□□ 0.55
FOXA1-204ENST00000554607 CELP19835 753 aa18.47■□□□□ 0.55
FOXA1-204ENST00000554607 ZBTB25P24278 435 aa18.47■□□□□ 0.55
FOXA1-204ENST00000554607 CEACAM6P40199 344 aa18.47■□□□□ 0.55
FOXA1-204ENST00000554607 LCN12Q6JVE5 192 aa18.47■□□□□ 0.55
FOXA1-204ENST00000554607 PQLC1Q8N2U9 271 aa18.47■□□□□ 0.55
FOXA1-204ENST00000554607 OR5T1Q8NG75 326 aa18.47■□□□□ 0.55
FOXA1-204ENST00000554607 TMEM68Q96MH6 324 aa18.47■□□□□ 0.55
FOXA1-204ENST00000554607 C11orf54Q9H0W9 315 aaPredicted RBP18.47■□□□□ 0.55
FOXA1-204ENST00000554607 DYNC1I1O14576 645 aa18.46■□□□□ 0.55
FOXA1-204ENST00000554607 CNIH1O95406 144 aa18.46■□□□□ 0.55
FOXA1-204ENST00000554607 AADACP22760 399 aa18.46■□□□□ 0.55
FOXA1-204ENST00000554607 SYNJ2BPP57105 145 aa18.46■□□□□ 0.55
FOXA1-204ENST00000554607 ST3GAL4Q11206 333 aa18.46■□□□□ 0.55
FOXA1-204ENST00000554607 IL34Q6ZMJ4 242 aa18.46■□□□□ 0.55
FOXA1-204ENST00000554607 PDPNQ86YL7 162 aa18.46■□□□□ 0.55
FOXA1-204ENST00000554607 Q8N402 240 aa18.46■□□□□ 0.55
FOXA1-204ENST00000554607 KCNG3Q8TAE7 436 aa18.46■□□□□ 0.55
FOXA1-204ENST00000554607 TM2D1Q9BX74 207 aa18.46■□□□□ 0.55
FOXA1-204ENST00000554607 PARP12Q9H0J9 701 aaKnown RBP18.46■□□□□ 0.55
FOXA1-204ENST00000554607 S100A14Q9HCY8 104 aa18.46■□□□□ 0.55
FOXA1-204ENST00000554607 PLEKHJ1Q9NW61 149 aa18.46■□□□□ 0.55
FOXA1-204ENST00000554607 SIGLEC8Q9NYZ4 499 aa18.46■□□□□ 0.55
FOXA1-204ENST00000554607 MGAT4AQ9UM21 535 aa18.46■□□□□ 0.55
FOXA1-204ENST00000554607 TRBV6-6A0A0A6YYG2 114 aa18.45■□□□□ 0.54
FOXA1-204ENST00000554607 EFCAB10A6NFE3 127 aa18.45■□□□□ 0.54
FOXA1-204ENST00000554607 BRI3O95415 125 aa18.45■□□□□ 0.54
FOXA1-204ENST00000554607 APOA2P02652 100 aa18.45■□□□□ 0.54
FOXA1-204ENST00000554607 IGKV1-16P04430 117 aa18.45■□□□□ 0.54
FOXA1-204ENST00000554607 HTR2CP28335 458 aa18.45■□□□□ 0.54
FOXA1-204ENST00000554607 GLT8D1Q68CQ7 371 aa18.45■□□□□ 0.54
FOXA1-204ENST00000554607 OR10K2Q6IF99 312 aa18.45■□□□□ 0.54
FOXA1-204ENST00000554607 DRAXINQ8NBI3 349 aaPredicted RBP18.45■□□□□ 0.54
FOXA1-204ENST00000554607 GGHQ92820 318 aa18.45■□□□□ 0.54
FOXA1-204ENST00000554607 THAP7Q9BT49 309 aaPredicted RBP18.45■□□□□ 0.54
FOXA1-204ENST00000554607 ZNF221Q9UK13 617 aa18.45■□□□□ 0.54
FOXA1-204ENST00000554607 SLC25A17O43808 307 aa18.44■□□□□ 0.54
FOXA1-204ENST00000554607 SETD9Q8NE22 299 aa18.44■□□□□ 0.54
FOXA1-204ENST00000554607 PTX4Q96A99 478 aa18.44■□□□□ 0.54
FOXA1-204ENST00000554607 PEF1Q9UBV8 284 aaKnown RBP18.44■□□□□ 0.54
FOXA1-204ENST00000554607 PROP1O75360 226 aa18.43■□□□□ 0.54
FOXA1-204ENST00000554607 C1orf100Q5SVJ3 147 aa18.43■□□□□ 0.54
FOXA1-204ENST00000554607 TTC23Q5W5X9 447 aa18.43■□□□□ 0.54
FOXA1-204ENST00000554607 ZNF383Q8NA42 475 aa18.43■□□□□ 0.54
FOXA1-204ENST00000554607 OR1A1Q9P1Q5 309 aa18.43■□□□□ 0.54
FOXA1-204ENST00000554607 MYL12BO14950 172 aa18.42■□□□□ 0.54
FOXA1-204ENST00000554607 CSN3P07498 182 aa18.42■□□□□ 0.54
FOXA1-204ENST00000554607 SNRPBP14678 240 aaKnown RBP18.42■□□□□ 0.54
FOXA1-204ENST00000554607 LGALS7P47929 136 aa18.42■□□□□ 0.54
FOXA1-204ENST00000554607 WNT4P56705 351 aa18.42■□□□□ 0.54
FOXA1-204ENST00000554607 HLA-DRB3P79483 266 aa18.42■□□□□ 0.54
FOXA1-204ENST00000554607 ZNF343Q6P1L6 599 aa18.42■□□□□ 0.54
FOXA1-204ENST00000554607 USMG5Q96IX5 58 aa18.42■□□□□ 0.54
FOXA1-204ENST00000554607 NICN1Q9BSH3 213 aa18.42■□□□□ 0.54
FOXA1-204ENST00000554607 TINAGL1Q9GZM7 467 aaPredicted RBP18.42■□□□□ 0.54
FOXA1-204ENST00000554607 SHISA3A0PJX4 238 aa18.41■□□□□ 0.54
FOXA1-204ENST00000554607 RPEL1Q2QD12 228 aa18.41■□□□□ 0.54
FOXA1-204ENST00000554607 OR2K2Q8NGT1 345 aa18.41■□□□□ 0.54
FOXA1-204ENST00000554607 PHYHIPQ92561 330 aa18.41■□□□□ 0.54
FOXA1-204ENST00000554607 CEPT1Q9Y6K0 416 aa18.41■□□□□ 0.54
FOXA1-204ENST00000554607 PLECQ15149 4684 aaKnown RBP18.4■□□□□ 0.54
FOXA1-204ENST00000554607 BPNT1O95861 308 aa18.4■□□□□ 0.54
FOXA1-204ENST00000554607 UNC119Q13432 240 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms