RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 HSPB7Q9UBY9 170 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 PSG11Q9UQ72 335 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 ODAMA1E959 279 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 GLRXP35754 106 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 TLE4Q04727 773 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 SCGB1C1Q8TD33 95 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 PRELID3BQ9Y3B1 194 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 HCFC1P51610 2035 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 BSNQ9UPA5 3926 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 SPINT2O43291 252 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 GFRA3O60609 400 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 DAOP14920 347 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 CFHR2P36980 270 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 KLF3P57682 345 aaPredicted RBP15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 HBG1P69891 147 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 HBG2P69892 147 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 HTD2P86397 168 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 EIF2S3LQ2VIR3 472 aaKnown RBP15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 Q3ZCU0 254 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 C22orf34Q6ZV56 151 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 MOGAT3Q86VF5 341 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 MUCL1Q96DR8 90 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 C14orf79Q96F83 325 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 MEGF10Q96KG7 1140 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 VSIRQ9H7M9 311 aa15.44■□□□□ 0.06
PRPF40B-208ENST00000548436 DSCAML1Q8TD84 2053 aa15.43■□□□□ 0.06
PRPF40B-208ENST00000548436 LRRC30A6NM36 301 aa15.43■□□□□ 0.06
PRPF40B-208ENST00000548436 PPIHO43447 177 aaKnown RBP15.43■□□□□ 0.06
PRPF40B-208ENST00000548436 TSPAN9O75954 239 aa15.43■□□□□ 0.06
PRPF40B-208ENST00000548436 CRYABP02511 175 aaKnown RBP15.43■□□□□ 0.06
PRPF40B-208ENST00000548436 LRRC75BQ2VPJ9 315 aa15.43■□□□□ 0.06
PRPF40B-208ENST00000548436 TRAT1Q6PIZ9 186 aa15.43■□□□□ 0.06
PRPF40B-208ENST00000548436 TMEM14EPQ6UXP3 125 aa15.43■□□□□ 0.06
PRPF40B-208ENST00000548436 LILRB2Q8N423 598 aa15.43■□□□□ 0.06
PRPF40B-208ENST00000548436 OR4C12Q96R67 309 aa15.43■□□□□ 0.06
PRPF40B-208ENST00000548436 RPRMQ9NS64 109 aa15.43■□□□□ 0.06
PRPF40B-208ENST00000548436 SPRY3O43610 288 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 ADH4P08319 380 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 CEACAM8P31997 349 aaPredicted RBP15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 ICAM4Q14773 271 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 C3orf36Q3SXR2 165 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 SOHLH1Q5JUK2 328 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 AVPI1Q5T686 147 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 ZNF66Q6ZN08 573 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 FAM90A1Q86YD7 464 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 ZNRF1Q8ND25 227 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 PLPPR2Q96GM1 343 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 PTPRZ1P23471 2315 aaPredicted RBP15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 CLDN14O95500 239 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 SRP19P09132 144 aaKnown RBP15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 PAX6P26367 422 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 FAM27E3Q08E93 113 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 C15orf54Q8N8G6 183 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 CLDND2Q8NHS1 167 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 ITLN1Q8WWA0 313 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 SNX22Q96L94 193 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 SAV1Q9H4B6 383 aaPredicted RBP15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 CLN8Q9UBY8 286 aa15.42■□□□□ 0.06
PRPF40B-208ENST00000548436 IGLV3-9A0A075B6K5 115 aa15.41■□□□□ 0.06
PRPF40B-208ENST00000548436 PROP1O75360 226 aa15.41■□□□□ 0.06
PRPF40B-208ENST00000548436 SCAF4O95104 1147 aaKnown RBP15.41■□□□□ 0.06
PRPF40B-208ENST00000548436 LHBP01229 141 aa15.41■□□□□ 0.06
PRPF40B-208ENST00000548436 FBP1P09467 338 aa15.41■□□□□ 0.06
PRPF40B-208ENST00000548436 OR8G2PQ6IF36 304 aa15.41■□□□□ 0.06
PRPF40B-208ENST00000548436 TCTEX1D1Q8N7M0 179 aa15.41■□□□□ 0.06
PRPF40B-208ENST00000548436 FAM57AQ8TBR7 257 aa15.41■□□□□ 0.06
PRPF40B-208ENST00000548436 HSD17B10Q99714 261 aaKnown RBP15.41■□□□□ 0.06
PRPF40B-208ENST00000548436 PSMG3Q9BT73 122 aaPredicted RBP15.41■□□□□ 0.06
PRPF40B-208ENST00000548436 SFXN3Q9BWM7 321 aa15.41■□□□□ 0.06
PRPF40B-208ENST00000548436 WDR61Q9GZS3 305 aaKnown RBP15.41■□□□□ 0.06
PRPF40B-208ENST00000548436 PRELID1Q9Y255 219 aa15.41■□□□□ 0.06
PRPF40B-208ENST00000548436 CEP250Q9BV73 2442 aa15.41■□□□□ 0.06
PRPF40B-208ENST00000548436 PLCE1Q9P212 2302 aa15.41■□□□□ 0.06
PRPF40B-208ENST00000548436 MGST3O14880 152 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 HBE1P02100 147 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 OR8U8P0C7N1 319 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 GZMHP20718 246 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 SLC38A11Q08AI6 406 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 ZNF726P1Q15940 193 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 CR1LQ2VPA4 569 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 MORN2Q502X0 79 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 ZNF506Q5JVG8 444 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 FAM201AQ5SY85 155 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 ISOC2Q96AB3 205 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 RBMXL1Q96E39 390 aaKnown RBP15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 EGLN1Q9GZT9 426 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 PUS1Q9Y606 427 aaKnown RBP eCLIP15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 RAI1Q7Z5J4 1906 aaPredicted RBP15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 TANC2Q9HCD6 1990 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 RP1L1Q8IWN7 2480 aaPredicted RBP15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 ZGRF1Q86YA3 2104 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 TRAV1-1A0A0B4J248 108 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 RAB29O14966 203 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 CD55P08174 381 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 RAB13P51153 203 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 NCR3LG1Q68D85 454 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 SSX7Q7RTT5 188 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 H2BFWTQ7Z2G1 175 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 ZDHHC16Q969W1 377 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms