RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 SOX6P35712 828 aa8.75□□□□□ -1.01
DDB1-222ENST00000543627 RORCP51449 518 aa8.75□□□□□ -1.01
DDB1-222ENST00000543627 SCAND1P57086 179 aa8.75□□□□□ -1.01
DDB1-222ENST00000543627 RPS16P62249 146 aaKnown RBP8.75□□□□□ -1.01
DDB1-222ENST00000543627 SLC35B1P78383 322 aa8.75□□□□□ -1.01
DDB1-222ENST00000543627 PNLIPRP3Q17RR3 467 aa8.75□□□□□ -1.01
DDB1-222ENST00000543627 UBE2NLQ5JXB2 153 aa8.75□□□□□ -1.01
DDB1-222ENST00000543627 TMEM69Q5SWH9 247 aa8.75□□□□□ -1.01
DDB1-222ENST00000543627 CLVS1Q8IUQ0 354 aaPredicted RBP8.75□□□□□ -1.01
DDB1-222ENST00000543627 Q8N6K4 173 aa8.75□□□□□ -1.01
DDB1-222ENST00000543627 ABHD5Q8WTS1 349 aa8.75□□□□□ -1.01
DDB1-222ENST00000543627 SLC25A46Q96AG3 418 aa8.75□□□□□ -1.01
DDB1-222ENST00000543627 ABCG5Q9H222 651 aa8.75□□□□□ -1.01
DDB1-222ENST00000543627 MMP27Q9H306 513 aa8.75□□□□□ -1.01
DDB1-222ENST00000543627 GHITMQ9H3K2 345 aa8.75□□□□□ -1.01
DDB1-222ENST00000543627 IFT46Q9NQC8 304 aa8.75□□□□□ -1.01
DDB1-222ENST00000543627 PLSCR3Q9NRY6 295 aa8.75□□□□□ -1.01
DDB1-222ENST00000543627 LIN7CQ9NUP9 197 aaKnown RBP8.75□□□□□ -1.01
DDB1-222ENST00000543627 SMIM31A0A1B0GVY4 71 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 ITGB1BP1O14713 200 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 NBR2O15453 112 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 TUSC2O75896 110 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 APOA2P02652 100 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 PF4V1P10720 104 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 MC5RP33032 325 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 LIN54Q6MZP7 749 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 ANKRD13BQ86YJ7 626 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 BEST4Q8NFU0 473 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 OR8H1Q8NGG4 311 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 CHPT1Q8WUD6 406 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 HSPB9Q9BQS6 159 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 AGMATQ9BSE5 352 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 CABLES2Q9BTV7 478 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 DCSTAMPQ9H295 470 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 FBXL15Q9H469 300 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 AUNIPQ9H7T9 357 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.74□□□□□ -1.01
DDB1-222ENST00000543627 PARP11Q9NR21 331 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 SLC35D1Q9NTN3 355 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 SDHAF2Q9NX18 166 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 ZNF107Q9UII5 783 aaPredicted RBP8.74□□□□□ -1.01
DDB1-222ENST00000543627 ANXA10Q9UJ72 324 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 WASHC3Q9Y3C0 194 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 WSB1Q9Y6I7 421 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 A3GALT2U3KPV4 340 aa8.74□□□□□ -1.01
DDB1-222ENST00000543627 OR5H14A6NHG9 310 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 NUDT19A8MXV4 375 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 H0YJW9 148 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 AP4M1O00189 453 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 KCNAB3O43448 404 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 XRCC3O43542 346 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 HPGDSO60760 199 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 IGHG2P01859 326 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 OPN1MWP04001 364 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 EIF4EP06730 217 aaKnown RBP8.73□□□□□ -1.01
DDB1-222ENST00000543627 CTXN2P0C2S0 81 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 OPN1MW2P0DN77 364 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 OPN1MW3P0DN78 364 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 VDAC1P21796 283 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 LUMP51884 338 aaPredicted RBP8.73□□□□□ -1.01
DDB1-222ENST00000543627 TAS2R20P59543 309 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 CBX3Q13185 183 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 RNASE12Q5GAN4 147 aaKnown RBP8.73□□□□□ -1.01
DDB1-222ENST00000543627 FAM71F2Q6NXP2 309 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 CNIH2Q6PI25 160 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 LCNL1Q6ZST4 164 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 NDUFA11Q86Y39 141 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 C1QL4Q86Z23 238 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 SNX29P2Q8IUI4 249 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 H1FOOQ8IZA3 346 aaPredicted RBP8.73□□□□□ -1.01
DDB1-222ENST00000543627 STPG2Q8N412 459 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 ZNF383Q8NA42 475 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 BVESQ8NE79 360 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 DCUN1D5Q9BTE7 237 aa8.73□□□□□ -1.01
DDB1-222ENST00000543627 TRRAPQ9Y4A5 3859 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 A0A0A6YYH2 397 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 A6NJ64 397 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 NOL3O60936 208 aaKnown RBP8.72□□□□□ -1.01
DDB1-222ENST00000543627 TMEM127O75204 238 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 PROP1O75360 226 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 PF4P02776 101 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 FCGR2CP31995 323 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 FXYD4P59646 89 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 GNB1P62873 340 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 CD83Q01151 205 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 CTF1Q16619 201 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 SRSF7Q16629 238 aaKnown RBP eCLIP8.72□□□□□ -1.01
DDB1-222ENST00000543627 C5orf64Q2M2E5 130 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 OR2B11Q5JQS5 317 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 TCTEX1D4Q5JR98 221 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 MZT2AQ6P582 158 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 FAM71E2Q8N5Q1 922 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 OR4F17Q8NGA8 305 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 FLYWCH2Q96CP2 140 aaKnown RBP8.72□□□□□ -1.01
DDB1-222ENST00000543627 OR4F4Q96R69 305 aa8.72□□□□□ -1.01
DDB1-222ENST00000543627 METTL1Q9UBP6 276 aaKnown RBP8.72□□□□□ -1.01
DDB1-222ENST00000543627 TSSC4Q9Y5U2 329 aaPredicted RBP8.72□□□□□ -1.01
DDB1-222ENST00000543627 CCDC160A6NGH7 325 aa8.71□□□□□ -1.02
DDB1-222ENST00000543627 FCN1O00602 326 aa8.71□□□□□ -1.02
DDB1-222ENST00000543627 RRHO14718 337 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms