RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 ZNF57Q68EA5 555 aaPredicted RBP4.73□□□□□ -1.65
ABCF1-207ENST00000542772 BRD3OSQ6XYD6 125 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 ZNF66Q6ZN08 573 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 ZNF818PQ6ZRF7 136 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 PDZD9Q8IXQ8 264 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 OR8H3Q8N146 312 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 LYG1Q8N1E2 194 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 DRAM1Q8N682 238 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 OR5AN1Q8NGI8 311 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 OR10X1Q8NGY0 326 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 ZFAND1Q8TCF1 268 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 ZFAND2BQ8WV99 257 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 C17orf50Q8WW18 174 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 RTN4IP1Q8WWV3 396 aaPredicted RBP4.73□□□□□ -1.65
ABCF1-207ENST00000542772 DDB2Q92466 427 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 C5orf30Q96GV9 206 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 ZNF48Q96MX3 618 aaPredicted RBP4.73□□□□□ -1.65
ABCF1-207ENST00000542772 SCGB3A2Q96PL1 93 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 S1PR3Q99500 378 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 BEX2Q9BXY8 128 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 MS4A7Q9GZW8 240 aaPredicted RBP4.73□□□□□ -1.65
ABCF1-207ENST00000542772 ALX4Q9H161 411 aaPredicted RBP4.73□□□□□ -1.65
ABCF1-207ENST00000542772 CCL28Q9NRJ3 127 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 FAM212BQ9NTI7 297 aaPredicted RBP4.73□□□□□ -1.65
ABCF1-207ENST00000542772 ZNF221Q9UK13 617 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 TBC1D24Q9ULP9 559 aa4.73□□□□□ -1.65
ABCF1-207ENST00000542772 SOX21Q9Y651 276 aaPredicted RBP4.73□□□□□ -1.65
ABCF1-207ENST00000542772 CUBNO60494 3623 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 IGHV3OR16-10A0A075B7F0 116 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 A0A0A6YYJ9 748 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 A0A1W2PPI3 338 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 A0A1W2PRD5 423 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 A0A1W2PRF3 423 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 A0A1W2PRM7 423 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 LINC00473A8K010 186 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 INAFM1C9JVW0 142 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 GPR31O00270 319 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 HSD17B6O14756 317 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 PGLYRP1O75594 196 aaPredicted RBP4.72□□□□□ -1.65
ABCF1-207ENST00000542772 NDUFB6O95139 128 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 CTSDP07339 412 aaPredicted RBP4.72□□□□□ -1.65
ABCF1-207ENST00000542772 FBP1P09467 338 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 FAM157CP0CG43 387 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 IL3RAP26951 378 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 SRP14P37108 136 aaKnown RBP4.72□□□□□ -1.65
ABCF1-207ENST00000542772 IER3P46695 156 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 GPR12P47775 334 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 INPP1P49441 399 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 THBS3P49746 956 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 LINC00205P59089 165 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 RPL30P62888 115 aaKnown RBP4.72□□□□□ -1.65
ABCF1-207ENST00000542772 SCGB2A2Q13296 93 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 DEFB112Q30KQ8 113 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 RPL39P5Q59GN2 51 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 CCDC144NLQ6NUI1 221 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 FAAP20Q6NZ36 180 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 IDO2Q6ZQW0 420 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 KCTD9Q7L273 389 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 TGIF2LXQ8IUE1 241 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 SLC38A6Q8IZM9 456 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 CADM3Q8N126 398 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 TCTEX1D1Q8N7M0 179 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 ZDHHC22Q8N966 263 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 MARCH1Q8TCQ1 289 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 RPEQ96AT9 228 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 ADTRPQ96IZ2 230 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 HSD17B10Q99714 261 aaKnown RBP4.72□□□□□ -1.65
ABCF1-207ENST00000542772 SSX3Q99909 188 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 RNF5Q99942 180 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 SLC5A7Q9GZV3 580 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 FXYD6Q9H0Q3 95 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 OR2D2Q9H210 308 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 C5orf66Q9H5L9 145 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 ABCB10Q9NRK6 738 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 RBM7Q9Y580 266 aaKnown RBP4.72□□□□□ -1.65
ABCF1-207ENST00000542772 HILPDAQ9Y5L2 63 aa4.72□□□□□ -1.65
ABCF1-207ENST00000542772 HIVEP2P31629 2446 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 CLDN34H7C241 214 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 MPPED1O15442 326 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 RBFOX2O43251 390 aaKnown RBP eCLIP4.71□□□□□ -1.66
ABCF1-207ENST00000542772 B3GALNT1O75752 331 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 TCRBP04435 133 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 IL6RP08887 468 aaPredicted RBP4.71□□□□□ -1.66
ABCF1-207ENST00000542772 RRASP10301 218 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 SRD5A1P18405 259 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 F2RP25116 425 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 BRS3P32247 399 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 RAB13P51153 203 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 CCR6P51684 374 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 RAG2P55895 527 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 FXYD4P59646 89 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 HERV-K104P61576 105 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 RBMS2Q15434 407 aaKnown RBP4.71□□□□□ -1.66
ABCF1-207ENST00000542772 SCGB2B2Q4G0G5 96 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 ZNF585BQ52M93 769 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 TMEM177Q53S58 311 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 MZT2BQ6NZ67 158 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 IL17RELQ6ZVW7 336 aa4.71□□□□□ -1.66
ABCF1-207ENST00000542772 Q71RC1 249 aaPredicted RBP4.71□□□□□ -1.66
ABCF1-207ENST00000542772 SLC25A42Q86VD7 318 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms