RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 TMEM11P17152 192 aa15.05■□□□□ -0
VPS33A-205ENST00000541169 PAX6P26367 422 aa15.05■□□□□ -0
VPS33A-205ENST00000541169 REG1BP48304 166 aa15.05■□□□□ -0
VPS33A-205ENST00000541169 RAG2P55895 527 aa15.05■□□□□ -0
VPS33A-205ENST00000541169 LSAMPQ13449 338 aa15.05■□□□□ -0
VPS33A-205ENST00000541169 HES1Q14469 280 aa15.05■□□□□ -0
VPS33A-205ENST00000541169 DHRS11Q6UWP2 260 aa15.05■□□□□ -0
VPS33A-205ENST00000541169 OVCH2Q7RTZ1 564 aa15.05■□□□□ -0
VPS33A-205ENST00000541169 ABHD14BQ96IU4 210 aa15.05■□□□□ -0
VPS33A-205ENST00000541169 RNF5Q99942 180 aa15.05■□□□□ -0
VPS33A-205ENST00000541169 ZNF251Q9BRH9 671 aa15.05■□□□□ -0
VPS33A-205ENST00000541169 OR2D2Q9H210 308 aa15.05■□□□□ -0
VPS33A-205ENST00000541169 C16orf95Q9H693 158 aa15.05■□□□□ -0
VPS33A-205ENST00000541169 MTFP1Q9UDX5 166 aa15.05■□□□□ -0
VPS33A-205ENST00000541169 FGF16O43320 207 aa15.04■□□□□ -0
VPS33A-205ENST00000541169 IGKV1D-33P01593 117 aa15.04■□□□□ -0
VPS33A-205ENST00000541169 IGKV1-33P01594 117 aa15.04■□□□□ -0
VPS33A-205ENST00000541169 SRSF2Q01130 221 aaKnown RBP15.04■□□□□ -0
VPS33A-205ENST00000541169 DYRK1AQ13627 763 aa15.04■□□□□ -0
VPS33A-205ENST00000541169 SPANXN2Q5MJ10 180 aa15.04■□□□□ -0
VPS33A-205ENST00000541169 CCBE1Q6UXH8 406 aaPredicted RBP15.04■□□□□ -0
VPS33A-205ENST00000541169 ZNF645Q8N7E2 425 aa15.04■□□□□ -0
VPS33A-205ENST00000541169 ZBTB34Q8NCN2 500 aa15.04■□□□□ -0
VPS33A-205ENST00000541169 SMIM4Q8WVI0 70 aa15.04■□□□□ -0
VPS33A-205ENST00000541169 NABP2Q9BQ15 211 aa15.04■□□□□ -0
VPS33A-205ENST00000541169 SLC25A33Q9BSK2 321 aa15.04■□□□□ -0
VPS33A-205ENST00000541169 PRSS22Q9GZN4 317 aa15.04■□□□□ -0
VPS33A-205ENST00000541169 PARP12Q9H0J9 701 aaKnown RBP15.04■□□□□ -0
VPS33A-205ENST00000541169 MOB4Q9Y3A3 225 aa15.04■□□□□ -0
VPS33A-205ENST00000541169 CUBNO60494 3623 aa15.04■□□□□ -0
VPS33A-205ENST00000541169 MEIS3P1A6NDR6 274 aa15.03■□□□□ -0
VPS33A-205ENST00000541169 ZNF736B4DX44 427 aaPredicted RBP15.03■□□□□ -0
VPS33A-205ENST00000541169 NFYAP23511 347 aaPredicted RBP15.03■□□□□ -0
VPS33A-205ENST00000541169 FCGR2CP31995 323 aa15.03■□□□□ -0
VPS33A-205ENST00000541169 CBX3Q13185 183 aa15.03■□□□□ -0
VPS33A-205ENST00000541169 TMEM17Q86X19 198 aa15.03■□□□□ -0
VPS33A-205ENST00000541169 OR5AN1Q8NGI8 311 aa15.03■□□□□ -0
VPS33A-205ENST00000541169 SPATA3Q8NHX4 192 aa15.03■□□□□ -0
VPS33A-205ENST00000541169 EHFQ9NZC4 300 aa15.03■□□□□ -0
VPS33A-205ENST00000541169 RNF150Q9ULK6 438 aa15.03■□□□□ -0
VPS33A-205ENST00000541169 GSTZ1O43708 216 aaPredicted RBP15.02■□□□□ -0
VPS33A-205ENST00000541169 PPYP01298 95 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 APOA2P02652 100 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 CSF1P09603 554 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 RRASP10301 218 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 THBS3P49746 956 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 RPL39P5Q59GN2 51 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 VAX1Q5SQQ9 334 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 LPCAT3Q6P1A2 487 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 LINC00299Q6ZSB3 139 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 TMEM219Q86XT9 240 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 PDPNQ86YL7 162 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 LYSMD2Q8IV50 215 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 Q8N2B8 174 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 OR6F1Q8NGZ6 308 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 OR52I2Q8NH67 350 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 OR2T6Q8NHC8 308 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 EAF1Q96JC9 268 aaPredicted RBP15.02■□□□□ -0
VPS33A-205ENST00000541169 SOSTQ9BQB4 213 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 MRPL20Q9BYC9 149 aaKnown RBP15.02■□□□□ -0
VPS33A-205ENST00000541169 SDHAF2Q9NX18 166 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 WASHC3Q9Y3C0 194 aa15.02■□□□□ -0
VPS33A-205ENST00000541169 A6NHS1 94 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 CHST1O43916 411 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 IFNA6P05013 189 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 CT45A6P0DMU7 189 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 CT45A5P0DMU8 189 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 CT45A7P0DMV0 189 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 CD24P25063 80 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 HRH1P35367 487 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 ETV6P41212 452 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 TAS2R19P59542 299 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 HERV-K104P61576 105 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 TSPAN5P62079 268 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 FAM131AQ6UXB0 335 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 ARRDC1Q8N5I2 433 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 Q8N6K4 173 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 TMEM229BQ8NBD8 167 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 HSD17B10Q99714 261 aaKnown RBP15.01□□□□□ -0.01
VPS33A-205ENST00000541169 MDFIQ99750 246 aa15.01□□□□□ -0.01
VPS33A-205ENST00000541169 CLPSL1A2RUU4 121 aa15□□□□□ -0.01
VPS33A-205ENST00000541169 M0R1X1 148 aa15□□□□□ -0.01
VPS33A-205ENST00000541169 HLA-DMAP28067 261 aa15□□□□□ -0.01
VPS33A-205ENST00000541169 MEF2DQ14814 521 aa15□□□□□ -0.01
VPS33A-205ENST00000541169 RTL8BQ17RB0 113 aa15□□□□□ -0.01
VPS33A-205ENST00000541169 RNASE10Q5GAN6 216 aaKnown RBP15□□□□□ -0.01
VPS33A-205ENST00000541169 Q6ZSV7 163 aa15□□□□□ -0.01
VPS33A-205ENST00000541169 DEDD2Q8WXF8 326 aa15□□□□□ -0.01
VPS33A-205ENST00000541169 KLK11Q9UBX7 282 aa15□□□□□ -0.01
VPS33A-205ENST00000541169 RBMX2Q9Y388 322 aaKnown RBP15□□□□□ -0.01
VPS33A-205ENST00000541169 PRELID3BQ9Y3B1 194 aa15□□□□□ -0.01
VPS33A-205ENST00000541169 IGHV3-72A0A0B4J1Y9 119 aa14.99□□□□□ -0.01
VPS33A-205ENST00000541169 H0YJW9 148 aa14.99□□□□□ -0.01
VPS33A-205ENST00000541169 H7C2Y5 167 aa14.99□□□□□ -0.01
VPS33A-205ENST00000541169 PMP2P02689 132 aa14.99□□□□□ -0.01
VPS33A-205ENST00000541169 AADACP22760 399 aa14.99□□□□□ -0.01
VPS33A-205ENST00000541169 S100GP29377 79 aa14.99□□□□□ -0.01
VPS33A-205ENST00000541169 RFX2P48378 723 aa14.99□□□□□ -0.01
VPS33A-205ENST00000541169 RELBQ01201 579 aa14.99□□□□□ -0.01
VPS33A-205ENST00000541169 FOXB2Q5VYV0 432 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms