RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 FCN1O00602 326 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 IGKV1-5P01602 117 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 ATP5G3P48201 142 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 SOX8P57073 446 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 TFF3Q07654 80 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 MMDQ15546 238 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 TECTBQ96PL2 329 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 OR6C1Q96RD1 312 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 C3orf80F5H4A9 247 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 SCRG1O75711 98 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 SLC25A6P12236 298 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 PCBD1P61457 104 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 CFHR1Q03591 330 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 Q6ZN92 141 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 TDHQ8IZJ6 230 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 OR2H1Q9GZK4 316 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 TRAPPC2LQ9UL33 140 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 ATG2AQ2TAZ0 1938 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 KIAA1324LA8MWY0 1029 aaPredicted RBP10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 HNRNPA3P51991 378 aaKnown RBP10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 Q6ZSR3 168 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 TSTD1Q8NFU3 115 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 LSM10Q969L4 123 aaKnown RBP10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 SFRP2Q96HF1 295 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 C19orf25Q9UFG5 118 aaPredicted RBP10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 A0A0J9YW62 118 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 LNP1A1A4G5 178 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 C17orf112F2Z3M2 114 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 SPINK4O60575 86 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 IGKV1-39P01597 117 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 IGKV1D-39P04432 117 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 PMCHP20382 165 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 EDDM3BP56851 147 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 RPL15P61313 204 aaKnown RBP10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 ZNF816Q0VGE8 651 aaPredicted RBP10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 SSPNQ14714 243 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 AARDQ4LEZ3 155 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 OR1L6Q8NGR2 347 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 SLC35E1Q96K37 410 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 MRPL18Q9H0U6 180 aaKnown RBP10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 COLQQ9Y215 455 aaPredicted RBP10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 ZFP30Q9Y2G7 519 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 WIPI2Q9Y4P8 454 aa10.9□□□□□ -0.66
SFSWAP-209ENST00000540469 LAMA1P25391 3075 aa10.9□□□□□ -0.67
SFSWAP-209ENST00000540469 DIRC3C9JPN6 131 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 UBE2NP61088 152 aaKnown RBP10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 ZXDAP98168 799 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 OR10G8Q8NGN5 311 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 TRAV38-1A0A0B4J264 116 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 LRP5LA4QPB2 252 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 SYNGR1O43759 233 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 SYNGR4O95473 234 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 IL6RP08887 468 aaPredicted RBP10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 IER3P46695 156 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 HTD2P86397 168 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 C20orf204Q6ZNR8 217 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 CENPVQ7Z7K6 275 aaPredicted RBP10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 FGFRL1Q8N441 504 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 FGFBP3Q8TAT2 258 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 STARD4Q96DR4 205 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 TIMM9Q9Y5J7 89 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 IGLV3-32A0A0A0MS00 114 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 PDE6DO43924 150 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 OR5G3P0C626 314 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 AMTP48728 403 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 SPATA45Q537H7 98 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 TPTE2P1Q5T6R2 138 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 ZNF808Q8N4W9 903 aaPredicted RBP10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 ZIC4Q8N9L1 334 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 C22orf15Q8WYQ4 148 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 ELOVL5Q9NYP7 299 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 MTCH1Q9NZJ7 389 aa10.89□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM90A10PA6NDY2 464 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM90A18PA6NE21 464 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM90A16PA6NEW6 464 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM90A20PA6NIJ5 464 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM90A8PA6NJQ4 464 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM90A7PA6NKC0 464 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM90A22PA8MWA6 464 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM90A12PA8MX19 464 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM90A5PA8MXJ8 464 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM90A23PA8MXZ1 464 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 SIRPB1O00241 398 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM90A15PP0C7V4 464 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM90A13PP0C7W8 464 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM90A14PP0C7W9 464 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM90A24PP0C7X0 464 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 GNB1P62873 340 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 PCSK4Q6UW60 755 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 FOXL2NBQ6ZUU3 175 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 TMPRSS7Q7RTY8 843 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 MRPL52Q86TS9 123 aaKnown RBP10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 YRDCQ86U90 279 aaKnown RBP10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 SRXN1Q9BYN0 137 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 ZNF552Q9H707 407 aaPredicted RBP10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 A0A096LPE4 126 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 A0A1W2PPZ6 126 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 SNURFLB1AK76 121 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 TIAF1O95411 115 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 CELA2AP08217 269 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms