RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 UCN2Q96RP3 112 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 CEACAM18A8MTB9 384 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 NPIPB6E9PJ23 425 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 VSIG10L2P0DP72 767 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 IBA57Q5T440 356 aaKnown RBP8.63□□□□□ -1.03
COL4A6-208ENST00000538570 EBLN2Q6P2I7 272 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 MRPL18Q9H0U6 180 aaKnown RBP8.63□□□□□ -1.03
COL4A6-208ENST00000538570 K7N7A8 449 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 REG1BP48304 166 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 GGTLC2Q14390 218 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 APOBEC4Q8WW27 367 aaKnown RBP8.63□□□□□ -1.03
COL4A6-208ENST00000538570 SCNM1Q9BWG6 230 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 TRAV8-2A0A0B4J237 113 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 SS18L1O75177 396 aaPredicted RBP8.63□□□□□ -1.03
COL4A6-208ENST00000538570 HSPB1P04792 205 aaKnown RBP8.63□□□□□ -1.03
COL4A6-208ENST00000538570 LIFP15018 202 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 SLC35B1P78383 322 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 MDP1Q86V88 176 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 BEND2Q8NDZ0 799 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 CDX2Q99626 313 aaPredicted RBP8.63□□□□□ -1.03
COL4A6-208ENST00000538570 PLAC1Q9HBJ0 212 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 NPIPB8E9PQR5 432 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 NPIPB7O75200 414 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 CLDN14O95500 239 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 RNFT1Q5M7Z0 435 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 FBXW9Q5XUX1 488 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 PPIAL4EA0A075B759 164 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 A0A1W2PPE3 182 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 PPIAL4DF5H284 164 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 HRKO00198 91 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 MPDU1O75352 247 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 PPIAL4FP0DN26 164 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 PRDX2P32119 198 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 CKS2P33552 79 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 FAM53AQ6NSI3 398 aaPredicted RBP8.63□□□□□ -1.03
COL4A6-208ENST00000538570 OR5A1Q8NGJ0 315 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 OR10AG1Q8NH19 301 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 IL36RNQ9UBH0 155 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 PPIAL4AQ9Y536 164 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 R4GN57 208 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 C1QTNF9BB2RNN3 333 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 H0YL77 283 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 NDUFB4O95168 129 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 RPL31P62899 125 aaKnown RBP8.63□□□□□ -1.03
COL4A6-208ENST00000538570 SRSF5Q13243 272 aaKnown RBP8.63□□□□□ -1.03
COL4A6-208ENST00000538570 C14orf144Q96I85 54 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 C16orf92Q96LL3 132 aa8.63□□□□□ -1.03
COL4A6-208ENST00000538570 MRPS18BQ9Y676 258 aaKnown RBP8.63□□□□□ -1.03
COL4A6-208ENST00000538570 H0Y980 276 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 PRSS8Q16651 343 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 C8orf82Q6P1X6 216 aaPredicted RBP8.62□□□□□ -1.03
COL4A6-208ENST00000538570 PPP1R3EQ9H7J1 279 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 MRPS18AQ9NVS2 196 aaKnown RBP8.62□□□□□ -1.03
COL4A6-208ENST00000538570 USP54Q70EL1 1684 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 MOSPD3O75425 235 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 PF4V1P10720 104 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 ESDP10768 282 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 FOLR2P14207 255 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 CFAP161Q6P656 301 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 ZNF441Q8N8Z8 693 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 PRR7Q8TB68 274 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 C19orf67A6NJJ6 358 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 GDF9O60383 454 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 GAPDHP04406 335 aaKnown RBP8.62□□□□□ -1.03
COL4A6-208ENST00000538570 RUNX1Q01196 453 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 VAX1Q5SQQ9 334 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 OR4A5Q8NH83 315 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 LSM10Q969L4 123 aaKnown RBP8.62□□□□□ -1.03
COL4A6-208ENST00000538570 ABHD14BQ96IU4 210 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 ZNF714Q96N38 554 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 TXNDC17Q9BRA2 123 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 OR5AC2Q9NZP5 309 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 C16orf97H3BN30 126 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 LEPROTL1O95214 131 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 ZAR1Q86SH2 424 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 C1orf174Q8IYL3 243 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 OR11H4Q8NGC9 324 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 NEU1Q99519 415 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 NINQ8N4C6 2090 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 H3BUT2 72 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 AMY1AP04745 511 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 CD1AP06126 327 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 MC5RP33032 325 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 RPL27AP46776 148 aaKnown RBP8.62□□□□□ -1.03
COL4A6-208ENST00000538570 RRN3P1Q2M238 152 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 FSCN3Q9NQT6 498 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 WBP1LQ9NX94 342 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 TUBD1Q9UJT1 453 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 LAMTOR2Q9Y2Q5 125 aa8.62□□□□□ -1.03
COL4A6-208ENST00000538570 TFPI2P48307 235 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 ZNF645Q8N7E2 425 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 COPS9Q8WXC6 57 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 METTL26Q96S19 204 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 DIRC2Q96SL1 478 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 HLA-DQA1P01909 254 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 RAB9AP51151 201 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 SMOC1Q9H4F8 434 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 TYMSP04818 313 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 TM4SF20Q53R12 229 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 TMEM186Q96B77 213 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms