RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 H1FOOQ8IZA3 346 aaPredicted RBP6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 POM121L2Q96KW2 1035 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 TMEM56Q96MV1 263 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 IMMP2LQ96T52 175 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 SLC17A5Q9NRA2 495 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 PLSCR2Q9NRY7 297 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 A0A0G2JLM5 398 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 ASPDHA6ND91 283 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 MPZL1O95297 269 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 PRTN3P24158 256 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 SSBP2P81877 361 aaPredicted RBP6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 FAM53BQ14153 422 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 ADAMTSL5Q6ZMM2 481 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 OSR2Q8N2R0 312 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 FAM19A2Q8N3H0 131 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 GPBAR1Q8TDU6 330 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 EDARADDQ8WWZ3 215 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 MYEOVQ96EZ4 313 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 PELI1Q96FA3 418 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 SPANXA1Q9NS26 97 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 VSIG4Q9Y279 399 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 PPIL1Q9Y3C6 166 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 TRAV8-7A0A075B6U6 113 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 TRAV8-1A0A0A6YYK1 113 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 C3orf80F5H4A9 247 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 SERF1AO75920 110 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 CDKN2AP42771 156 aaKnown RBP6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 MFAP2P55001 183 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 SFTPA2Q8IWL1 248 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 SFTPA1Q8IWL2 248 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 APOBEC3DQ96AK3 386 aaPredicted RBP6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 SEBOXQ9HB31 216 aaPredicted RBP6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 SLC7A10Q9NS82 523 aa6.08□□□□□ -1.44
TGFBR3-210ENST00000533089 LOC285556D6RIA3 1793 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 A0A087WWC5 75 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 LILRA5A6NI73 299 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 IGHV3-13P01766 116 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 IGHV3-7P01780 117 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 PNLIPP16233 465 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 TNFAIP6P98066 277 aaPredicted RBP6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 HIST1H1AQ02539 215 aaPredicted RBP6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 BHLHA9Q7RTU4 235 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 C17orf47Q8NEP4 570 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 SPXQ9BT56 116 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 ST20Q9HBF5 79 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 NRN1Q9NPD7 142 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 TAAR3PQ9P1P4 343 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 EPOPA6NHQ4 379 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 HLA-DQA1P01909 254 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 RUNX1Q01196 453 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 SFTA2Q6UW10 78 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 C1QL4Q86Z23 238 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 TMEM170AQ8WVE7 144 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 WDYHV1Q96HA8 205 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 SH3BGRL3Q9H299 93 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 ZNF815PA8K554 130 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 ALG1L2C9J202 215 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 CD40P25942 277 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 MAS1LP35410 378 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 SOX8P57073 446 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 LRRC75BQ2VPJ9 315 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 CEACAM21Q3KPI0 293 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 PWWP2BQ6NUJ5 590 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 RASL11AQ6T310 242 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 OR4C3Q8NH37 302 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 OR1F12Q8NHA8 337 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 MRPL24Q96A35 216 aaKnown RBP6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 RAB40CQ96S21 281 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 AAMDCQ9H7C9 122 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 ZNF665Q9H7R5 613 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 NHP2Q9NX24 153 aaKnown RBP6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 ERRFI1Q9UJM3 462 aaPredicted RBP6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 TRAV9-2A0A087WT02 112 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 TMEM30CPA0ZSE6 113 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 HLA-DQB1P01920 261 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 GAPDHP04406 335 aaKnown RBP6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 CD3EP07766 207 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 ADRA2AP08913 450 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 ZNF735P0CB33 412 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 ZBTB25P24278 435 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 PMELP40967 661 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 IL11RAQ14626 422 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 SSPNQ14714 243 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 PDCD1Q15116 288 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 TEX38Q6PEX7 206 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 C1orf122Q6ZSJ8 110 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 ZNF502Q8TBZ5 544 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 MYOZ3Q8TDC0 251 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 PTX4Q96A99 478 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 TMEM45BQ96B21 275 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 PILRBQ9UKJ0 227 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 A0A1B0GU03 582 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 CTSDP07339 412 aaPredicted RBP6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 LINC00869P0C866 280 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 CA6P23280 308 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 OPRK1P41145 380 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 UBE2L3P68036 154 aaKnown RBP6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 ZXDAP98168 799 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 FAM181AQ8N9Y4 354 aa6.07□□□□□ -1.44
TGFBR3-210ENST00000533089 C5orf17Q8NAS9 161 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms