RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 OR51A2Q8NGJ7 313 aa9.65□□□□□ -0.86
CAPN1-223ENST00000533079 OR51T1Q8NGJ9 327 aa9.65□□□□□ -0.86
CAPN1-223ENST00000533079 C7orf50Q9BRJ6 194 aaKnown RBP9.65□□□□□ -0.86
CAPN1-223ENST00000533079 DIABLOQ9NR28 239 aa9.65□□□□□ -0.86
CAPN1-223ENST00000533079 RAB22AQ9UL26 194 aa9.65□□□□□ -0.86
CAPN1-223ENST00000533079 VSIG4Q9Y279 399 aa9.65□□□□□ -0.86
CAPN1-223ENST00000533079 PLA2G10O15496 165 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 TXNL1O43396 289 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 MOSP00540 346 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 OR8U9P0C7N5 309 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 UBBP0CG47 229 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 IGHV4-30-4P0DP06 118 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 ARSBP15848 533 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 CD1BP29016 333 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 GNG10P50151 68 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 CLDN12P56749 244 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 ZP1P60852 638 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 RAB12Q6IQ22 244 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 MZT2BQ6NZ67 158 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 MOB3BQ86TA1 216 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 ZNF491Q8N8L2 437 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 DUSP18Q8NEJ0 188 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 SMIM4Q8WVI0 70 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 ST6GALNAC6Q969X2 333 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 RFT1Q96AA3 541 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 S1PR3Q99500 378 aa9.64□□□□□ -0.87
CAPN1-223ENST00000533079 RBMX2Q9Y388 322 aaKnown RBP9.64□□□□□ -0.87
CAPN1-223ENST00000533079 IGKV1-9A0A0C4DH69 117 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 TMEM272A0A1B0GTI8 110 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 GABARAPH6UMI1 98 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 SULT1C2O00338 296 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 MAGEB3O15480 346 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 IFNA6P05013 189 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 ZNF93P35789 620 aaPredicted RBP9.63□□□□□ -0.87
CAPN1-223ENST00000533079 RFX2P48378 723 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 KCNJ3P48549 501 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 QRFPP83859 136 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 SSBP1Q04837 148 aaKnown RBP9.63□□□□□ -0.87
CAPN1-223ENST00000533079 DYRK1AQ13627 763 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 Q6P435 159 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 ACSM6Q6P461 480 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 SGPP2Q8IWX5 399 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 C8orf31Q8N9H6 132 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 TMEM104Q8NE00 496 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 OR13A1Q8NGR1 328 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 DCUN1D4Q92564 292 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 LEAP2Q969E1 77 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 TRIM63Q969Q1 353 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 CPNE2Q96FN4 548 aaPredicted RBP9.63□□□□□ -0.87
CAPN1-223ENST00000533079 HSPB9Q9BQS6 159 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 GNB4Q9HAV0 340 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 C19orf73Q9NVV2 129 aa9.63□□□□□ -0.87
CAPN1-223ENST00000533079 MRPS28Q9Y2Q9 187 aaKnown RBP9.63□□□□□ -0.87
CAPN1-223ENST00000533079 MEIKINA0A087WXM9 373 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 IGKV1-12A0A0C4DH73 117 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 METTL21EPA6NDL7 271 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 H3BSH0 61 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 DEGS1O15121 323 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 HSPA12AO43301 675 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 IGKV1D-12P01611 117 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 IGHV3-7P01780 117 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 GSTT2BP0CG30 244 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 IL3RAP26951 378 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 PPIFP30405 207 aaKnown RBP9.62□□□□□ -0.87
CAPN1-223ENST00000533079 GNB1P62873 340 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 SRSF7Q16629 238 aaKnown RBP eCLIP9.62□□□□□ -0.87
CAPN1-223ENST00000533079 TMEM69Q5SWH9 247 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 JAGN1Q8N5M9 183 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 OR13C9Q8NGT0 318 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 CHAC2Q8WUX2 184 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 RTN4IP1Q8WWV3 396 aaPredicted RBP9.62□□□□□ -0.87
CAPN1-223ENST00000533079 C11orf54Q9H0W9 315 aaPredicted RBP9.62□□□□□ -0.87
CAPN1-223ENST00000533079 SCPEP1Q9HB40 452 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 PLSCR3Q9NRY6 295 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 ING3Q9NXR8 418 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 ZNF107Q9UII5 783 aaPredicted RBP9.62□□□□□ -0.87
CAPN1-223ENST00000533079 KIF25Q9UIL4 384 aa9.62□□□□□ -0.87
CAPN1-223ENST00000533079 IGHV3-72A0A0B4J1Y9 119 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 TMEM14DPA8MWL7 114 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 LINC01619G3V211 115 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 IGLV1-40P01703 118 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 INPP1P49441 399 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 BCAP31P51572 246 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 TAS2R20P59543 309 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 AP3S2P59780 193 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 KIAA0141Q14154 515 aaPredicted RBP9.61□□□□□ -0.87
CAPN1-223ENST00000533079 Q3ZCU0 254 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 ASCL4Q6XD76 172 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 NRARPQ7Z6K4 114 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 LINC00311Q8N616 119 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 OR52M1Q8NGK5 317 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 KCNG3Q8TAE7 436 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 FCAMRQ8WWV6 532 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 TAS2R8Q9NYW2 309 aa9.61□□□□□ -0.87
CAPN1-223ENST00000533079 MRPS7Q9Y2R9 242 aaKnown RBP9.61□□□□□ -0.87
CAPN1-223ENST00000533079 NAP1L6A6NFF2 107 aa9.6□□□□□ -0.87
CAPN1-223ENST00000533079 CENPXA8MT69 81 aa9.6□□□□□ -0.87
CAPN1-223ENST00000533079 ARPC1BO15143 372 aaKnown RBP9.6□□□□□ -0.87
CAPN1-223ENST00000533079 LYRM1O43325 122 aa9.6□□□□□ -0.87
CAPN1-223ENST00000533079 SSTR5P35346 364 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms