RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 HIST2H3AQ71DI3 136 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 C9orf62Q8N4C0 152 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 PAQR4Q8N4S7 273 aaPredicted RBP12.76□□□□□ -0.37
USP47-207ENST00000527733 ZNF524Q96C55 264 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 RCC2Q9P258 522 aaKnown RBP12.76□□□□□ -0.37
USP47-207ENST00000527733 WISP1O95388 367 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 IL36RNQ9UBH0 155 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 WASHC3Q9Y3C0 194 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 TRIM77I1YAP6 450 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 CT45A10P0DMU9 189 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 OTX1P32242 354 aaPredicted RBP12.76□□□□□ -0.37
USP47-207ENST00000527733 SMCO4Q9NRQ5 59 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 IGHV3-72A0A0B4J1Y9 119 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 LEUTXA8MZ59 168 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 FOXH1O75593 365 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 FGFRL1Q8N441 504 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 LEAP2Q969E1 77 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 GPHA2Q96T91 129 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 HIF1ANQ9NWT6 349 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 PLXND1Q9Y4D7 1925 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 NPBWR1P48145 328 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 RHOBP62745 196 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 FLI1Q01543 452 aaPredicted RBP12.75□□□□□ -0.37
USP47-207ENST00000527733 ANKRD55Q3KP44 614 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 LGALSLQ3ZCW2 172 aaPredicted RBP12.75□□□□□ -0.37
USP47-207ENST00000527733 WDR82Q6UXN9 313 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 FAM89BQ8N5H3 189 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 SMIM7Q9BQ49 75 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 SIRT7Q9NRC8 400 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 OR51B2Q9Y5P1 312 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 MAP1LC3B2A6NCE7 125 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 UBE2G2P60604 165 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 BPIFCQ8NFQ6 507 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 SPSB4Q96A44 273 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 GFI1Q99684 422 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 MAP1LC3BQ9GZQ8 125 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 BIN3Q9NQY0 253 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 SLC45A2Q9UMX9 530 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 PCP4L1A6NKN8 68 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 TXNL1O43396 289 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 TMEM65Q6PI78 240 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 IGF2-ASQ6U949 168 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 BTNL8Q6UX41 500 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 ZNF818PQ6ZRF7 136 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 DRAM1Q8N682 238 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 TMEM186Q96B77 213 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 CLEC7AQ9BXN2 247 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 COA4Q9NYJ1 87 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 TNFSF18Q9UNG2 199 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 TIMM9Q9Y5J7 89 aa12.75□□□□□ -0.37
USP47-207ENST00000527733 TM4SF5O14894 197 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 OR10G4Q8NGN3 311 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 OR10G9Q8NGN4 311 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 OR10G7Q8NGN6 311 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 C20orf24Q9BUV8 137 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 ZNF835Q9Y2P0 537 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 H7BYZ3 331 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 MBPP02686 304 aaPredicted RBP12.74□□□□□ -0.37
USP47-207ENST00000527733 HOXD11P31277 338 aaPredicted RBP12.74□□□□□ -0.37
USP47-207ENST00000527733 CDC34P49427 236 aaPredicted RBP12.74□□□□□ -0.37
USP47-207ENST00000527733 WFIKKN1Q96NZ8 548 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 TNFRSF19Q9NS68 423 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 CA7P43166 264 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 RPL27AP46776 148 aaKnown RBP12.74□□□□□ -0.37
USP47-207ENST00000527733 IL22RA2Q969J5 263 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 CBLN4Q9NTU7 201 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 TRBV23-1A0A0A0MS06 115 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 PJVKQ0ZLH3 352 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 ZNF345Q14585 488 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 SSX2Q16385 188 aa12.74□□□□□ -0.37
USP47-207ENST00000527733 ZCCHC24Q8N2G6 241 aaKnown RBP12.74□□□□□ -0.37
USP47-207ENST00000527733 SOX15O60248 233 aa12.73□□□□□ -0.37
USP47-207ENST00000527733 MMP9P14780 707 aa12.73□□□□□ -0.37
USP47-207ENST00000527733 SPCS3P61009 180 aa12.73□□□□□ -0.37
USP47-207ENST00000527733 GUK1Q16774 197 aa12.73□□□□□ -0.37
USP47-207ENST00000527733 ZNF474Q6S9Z5 364 aaPredicted RBP12.73□□□□□ -0.37
USP47-207ENST00000527733 KDF1Q8NAX2 398 aaPredicted RBP12.73□□□□□ -0.37
USP47-207ENST00000527733 OR1L4Q8NGR5 311 aa12.73□□□□□ -0.37
USP47-207ENST00000527733 FAM106CPP0CH98 169 aa12.73□□□□□ -0.37
USP47-207ENST00000527733 MEF2CQ06413 473 aaPredicted RBP12.73□□□□□ -0.37
USP47-207ENST00000527733 MBNL2Q5VZF2 373 aaKnown RBP12.73□□□□□ -0.37
USP47-207ENST00000527733 SMIM15Q7Z3B0 74 aa12.73□□□□□ -0.37
USP47-207ENST00000527733 MMD2Q8IY49 270 aa12.73□□□□□ -0.37
USP47-207ENST00000527733 OR13A1Q8NGR1 328 aa12.73□□□□□ -0.37
USP47-207ENST00000527733 SAT2Q96F10 170 aaPredicted RBP12.73□□□□□ -0.37
USP47-207ENST00000527733 PLSCR2Q9NRY7 297 aa12.73□□□□□ -0.37
USP47-207ENST00000527733 CADP27708 2225 aa12.73□□□□□ -0.37
USP47-207ENST00000527733 GNG7O60262 68 aa12.73□□□□□ -0.37
USP47-207ENST00000527733 TMEM11P17152 192 aa12.73□□□□□ -0.37
USP47-207ENST00000527733 DHRS7BQ6IAN0 325 aaPredicted RBP12.73□□□□□ -0.37
USP47-207ENST00000527733 CHAC2Q8WUX2 184 aa12.73□□□□□ -0.37
USP47-207ENST00000527733 GTF3AQ92664 365 aaKnown RBP12.73□□□□□ -0.37
USP47-207ENST00000527733 AKR1C3P42330 323 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 SCGB2A2Q13296 93 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 GPR146Q96CH1 333 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 SOSTQ9BQB4 213 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 MMP26Q9NRE1 261 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 HLA-GP17693 338 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 BMI1P35226 326 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 RPL8P62917 257 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms