RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SSX5O60225 188 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 FBXO24O75426 580 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 RRASP10301 218 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 ELK1P19419 428 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 NFYAP23511 347 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 S100GP29377 79 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 RCVRNP35243 200 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 THBS3P49746 956 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 PROK1P58294 105 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 ACTBP60709 375 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 BLCAPP62952 87 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 SLC35B1P78383 322 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 EBI3Q14213 229 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 SPCS2Q15005 226 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 CDK10Q15131 360 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 C2orf68Q2NKX9 166 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 ACTBL2Q562R1 376 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 RPL39P5Q59GN2 51 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 C5orf24Q7Z6I8 188 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 SLC35E3Q7Z769 313 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 CENPVQ7Z7K6 275 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 PDPNQ86YL7 162 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 SNX29P2Q8IUI4 249 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 ODF3L1Q8IXM7 274 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 H1FOOQ8IZA3 346 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 ZNF645Q8N7E2 425 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 C5orf56Q8N8D9 126 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR5AP2Q8NGF4 316 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 CHPT1Q8WUD6 406 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 TSNAXQ99598 290 aaKnown RBP4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 C6orf62Q9GZU0 229 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 PARP12Q9H0J9 701 aaKnown RBP4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 SLC35D1Q9NTN3 355 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 EHFQ9NZC4 300 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 RABL2AQ9UBK7 228 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 EXTL2Q9UBQ6 330 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 RSL24D1Q9UHA3 163 aaKnown RBP4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 RABL2BQ9UNT1 228 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 SIGLEC9Q9Y336 463 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 PRELID3BQ9Y3B1 194 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR2W1Q9Y3N9 320 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 IGKV1D-8A0A087WSZ0 117 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 PSMB11A5LHX3 300 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 MEIS3P1A6NDR6 274 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 ZNF736B4DX44 427 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 H0YJW9 148 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 J3QRK9 145 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 AP4M1O00189 453 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 CREBL2O60519 120 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 TUSC2O75896 110 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 TPPPO94811 219 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 SPDEFO95238 335 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 OPN1MWP04001 364 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 IFNA6P05013 189 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 FCER2P06734 321 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 CT45A6P0DMU7 189 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 CT45A5P0DMU8 189 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 CT45A7P0DMV0 189 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 OPN1MW2P0DN77 364 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 OPN1MW3P0DN78 364 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR5H8P0DN80 308 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 VDAC1P21796 283 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 FCGR2CP31995 323 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 S100A5P33763 92 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 FXYD4P59646 89 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 TSPAN5P62079 268 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 RPS16P62249 146 aaKnown RBP4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 MRPS10P82664 201 aaKnown RBP4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 CATR1Q13166 79 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 KHDC1LQ5JSQ8 128 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 GLDNQ6ZMI3 551 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 KCTD9Q7L273 389 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 TMEM17Q86X19 198 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 Q8N6K4 173 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 GVQW1Q8N7I0 195 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 POC5Q8NA72 575 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 DRAXINQ8NBI3 349 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR5AN1Q8NGI8 311 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR6F1Q8NGZ6 308 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 MCFD2Q8NI22 146 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 DYNC2LI1Q8TCX1 351 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 ABHD5Q8WTS1 349 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 SECTM1Q8WVN6 248 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 FCAMRQ8WWV6 532 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 FLYWCH2Q96CP2 140 aaKnown RBP4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 DIRAS2Q96HU8 199 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 HSD17B10Q99714 261 aaKnown RBP4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 RNF5Q99942 180 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 CITED1Q99966 193 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 AGMATQ9BSE5 352 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 DCUN1D5Q9BTE7 237 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 SLC5A7Q9GZV3 580 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 TOLLIPQ9H0E2 274 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 SERTAD4Q9NUC0 356 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 SDHAF2Q9NX18 166 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 NDUFA13Q9P0J0 144 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 ZNF107Q9UII5 783 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 GAB2Q9UQC2 676 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 DSCAML1Q8TD84 2053 aa4.3□□□□□ -1.72
HMGB1P40-201ENST00000525121 SH2D7A6NKC9 451 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms