RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 TXNL4BQ9NX01 149 aaKnown RBP13.34□□□□□ -0.27
SQLE-205ENST00000521232 RDH8Q9NYR8 311 aa13.34□□□□□ -0.27
SQLE-205ENST00000521232 KIAA1456Q9P272 454 aa13.34□□□□□ -0.27
SQLE-205ENST00000521232 RNF150Q9ULK6 438 aa13.34□□□□□ -0.27
SQLE-205ENST00000521232 METTL21EPA6NDL7 271 aa13.33□□□□□ -0.28
SQLE-205ENST00000521232 CCL24O00175 119 aa13.33□□□□□ -0.28
SQLE-205ENST00000521232 MFNGO00587 321 aa13.33□□□□□ -0.28
SQLE-205ENST00000521232 RBBP9O75884 186 aa13.33□□□□□ -0.28
SQLE-205ENST00000521232 FCGR3AP08637 254 aa13.33□□□□□ -0.28
SQLE-205ENST00000521232 GNB3P16520 340 aa13.33□□□□□ -0.28
SQLE-205ENST00000521232 EGFEM1PQ0D2K5 195 aa13.33□□□□□ -0.28
SQLE-205ENST00000521232 MCRIP2Q9BUT9 160 aaKnown RBP13.33□□□□□ -0.28
SQLE-205ENST00000521232 GPR61Q9BZJ8 451 aa13.33□□□□□ -0.28
SQLE-205ENST00000521232 STUB1Q9UNE7 303 aa13.33□□□□□ -0.28
SQLE-205ENST00000521232 WASHC3Q9Y3C0 194 aa13.33□□□□□ -0.28
SQLE-205ENST00000521232 WSB1Q9Y6I7 421 aa13.33□□□□□ -0.28
SQLE-205ENST00000521232 A0A0B4J203 849 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 G3V318 75 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 RRHO14718 337 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 ATP6V0E1O15342 81 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 FABP7O15540 132 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 DIRAS3O95661 229 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 GSTP1P09211 210 aaKnown RBP13.32□□□□□ -0.28
SQLE-205ENST00000521232 GSTT2P0CG29 244 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 GSTT2BP0CG30 244 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 HIST1H1DP16402 221 aaKnown RBP13.32□□□□□ -0.28
SQLE-205ENST00000521232 KRTAP10-11P60412 298 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 KIAA0141Q14154 515 aaPredicted RBP13.32□□□□□ -0.28
SQLE-205ENST00000521232 SRSF7Q16629 238 aaKnown RBP eCLIP13.32□□□□□ -0.28
SQLE-205ENST00000521232 ZNF660Q6AZW8 331 aaPredicted RBP13.32□□□□□ -0.28
SQLE-205ENST00000521232 ZNF773Q6PK81 442 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 TPRA1Q86W33 373 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 OR8U1Q8NH10 309 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 MYOZ3Q8TDC0 251 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 DUX3Q96PT4 197 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 CABLES2Q9BTV7 478 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 ZNF221Q9UK13 617 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 GAB2Q9UQC2 676 aa13.32□□□□□ -0.28
SQLE-205ENST00000521232 TRBV6-7A0A0A0MS04 114 aa13.31□□□□□ -0.28
SQLE-205ENST00000521232 NOTOA8MTQ0 251 aa13.31□□□□□ -0.28
SQLE-205ENST00000521232 H7C2Y5 167 aa13.31□□□□□ -0.28
SQLE-205ENST00000521232 IGLV1-40P01703 118 aa13.31□□□□□ -0.28
SQLE-205ENST00000521232 ARL6IP1Q15041 203 aa13.31□□□□□ -0.28
SQLE-205ENST00000521232 IGSF11Q5DX21 431 aa13.31□□□□□ -0.28
SQLE-205ENST00000521232 Q6ZS49 121 aa13.31□□□□□ -0.28
SQLE-205ENST00000521232 DRAXINQ8NBI3 349 aaPredicted RBP13.31□□□□□ -0.28
SQLE-205ENST00000521232 MINDY2Q8NBR6 621 aa13.31□□□□□ -0.28
SQLE-205ENST00000521232 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.31□□□□□ -0.28
SQLE-205ENST00000521232 FBXL15Q9H469 300 aa13.31□□□□□ -0.28
SQLE-205ENST00000521232 PARP11Q9NR21 331 aa13.31□□□□□ -0.28
SQLE-205ENST00000521232 SSR3Q9UNL2 185 aa13.31□□□□□ -0.28
SQLE-205ENST00000521232 DNAH9Q9NYC9 4486 aa13.31□□□□□ -0.28
SQLE-205ENST00000521232 A0A075B6Q4 140 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 TRAV41A0A0B4J266 112 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 FCN1O00602 326 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 BET1O15155 118 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 TFAP2AP05549 437 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 CRIP2P52943 208 aaPredicted RBP13.3□□□□□ -0.28
SQLE-205ENST00000521232 LINC00205P59089 165 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 CX3CL1P78423 397 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 DEFB136Q30KP8 78 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 TMEM65Q6PI78 240 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 ZNF383Q8NA42 475 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 OR10J5Q8NHC4 309 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 C4orf3Q8WVX3 66 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 UBE2E2Q96LR5 201 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 CENPOQ9BU64 300 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 ATG5Q9H1Y0 275 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 KLK15Q9H2R5 256 aa13.3□□□□□ -0.28
SQLE-205ENST00000521232 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.3□□□□□ -0.28
SQLE-205ENST00000521232 ZNF230Q9UIE0 474 aaPredicted RBP13.3□□□□□ -0.28
SQLE-205ENST00000521232 SMIM30A4D0T7 59 aa13.29□□□□□ -0.28
SQLE-205ENST00000521232 K7EIL1 84 aa13.29□□□□□ -0.28
SQLE-205ENST00000521232 EGR2P11161 476 aaPredicted RBP13.29□□□□□ -0.28
SQLE-205ENST00000521232 HOXD3P31249 432 aaPredicted RBP13.29□□□□□ -0.28
SQLE-205ENST00000521232 NDPQ00604 133 aa13.29□□□□□ -0.28
SQLE-205ENST00000521232 ARFRP1Q13795 201 aa13.29□□□□□ -0.28
SQLE-205ENST00000521232 PSG5Q15238 335 aa13.29□□□□□ -0.28
SQLE-205ENST00000521232 C19orf54Q5BKX5 351 aa13.29□□□□□ -0.28
SQLE-205ENST00000521232 PDPNQ86YL7 162 aa13.29□□□□□ -0.28
SQLE-205ENST00000521232 ZNF491Q8N8L2 437 aa13.29□□□□□ -0.28
SQLE-205ENST00000521232 MAFIPQ8WZ33 124 aa13.29□□□□□ -0.28
SQLE-205ENST00000521232 DPF1Q92782 380 aa13.29□□□□□ -0.28
SQLE-205ENST00000521232 OR51E2Q9H255 320 aa13.29□□□□□ -0.28
SQLE-205ENST00000521232 FBXO7Q9Y3I1 522 aa13.29□□□□□ -0.28
SQLE-205ENST00000521232 NUBP2Q9Y5Y2 271 aa13.29□□□□□ -0.28
SQLE-205ENST00000521232 IGKV1-16P04430 117 aa13.28□□□□□ -0.28
SQLE-205ENST00000521232 OR8U9P0C7N5 309 aa13.28□□□□□ -0.28
SQLE-205ENST00000521232 TALDO1P37837 337 aa13.28□□□□□ -0.28
SQLE-205ENST00000521232 RAB9AP51151 201 aa13.28□□□□□ -0.28
SQLE-205ENST00000521232 RUNX1Q01196 453 aa13.28□□□□□ -0.28
SQLE-205ENST00000521232 FHL3Q13643 280 aa13.28□□□□□ -0.28
SQLE-205ENST00000521232 PLGLAQ15195 96 aa13.28□□□□□ -0.28
SQLE-205ENST00000521232 CDNFQ49AH0 187 aa13.28□□□□□ -0.28
SQLE-205ENST00000521232 ZNF562Q6V9R5 426 aa13.28□□□□□ -0.28
SQLE-205ENST00000521232 TSNAXQ99598 290 aaKnown RBP13.28□□□□□ -0.28
SQLE-205ENST00000521232 SDHAF2Q9NX18 166 aa13.28□□□□□ -0.28
SQLE-205ENST00000521232 ELF5Q9UKW6 265 aaPredicted RBP13.28□□□□□ -0.28
SQLE-205ENST00000521232 VSIG4Q9Y279 399 aa13.28□□□□□ -0.28
SQLE-205ENST00000521232 WI2-2373I1.2A0A1W2PRP0 233 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms