RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 OMGP23515 440 aa7□□□□□ -1.29
VAPB-206ENST00000520497 GNRHRP30968 328 aa7□□□□□ -1.29
VAPB-206ENST00000520497 PPP1CCP36873 323 aaKnown RBP7□□□□□ -1.29
VAPB-206ENST00000520497 NKX2-5P52952 324 aaPredicted RBP7□□□□□ -1.29
VAPB-206ENST00000520497 H2BFSP57053 126 aa7□□□□□ -1.29
VAPB-206ENST00000520497 DSCR9P59020 149 aa7□□□□□ -1.29
VAPB-206ENST00000520497 GNB2P62879 340 aa7□□□□□ -1.29
VAPB-206ENST00000520497 PAX2Q02962 417 aa7□□□□□ -1.29
VAPB-206ENST00000520497 ANKRD55Q3KP44 614 aa7□□□□□ -1.29
VAPB-206ENST00000520497 MORN2Q502X0 79 aa7□□□□□ -1.29
VAPB-206ENST00000520497 LY6G6FQ5SQ64 297 aa7□□□□□ -1.29
VAPB-206ENST00000520497 FAM53AQ6NSI3 398 aaPredicted RBP7□□□□□ -1.29
VAPB-206ENST00000520497 ZNF818PQ6ZRF7 136 aa7□□□□□ -1.29
VAPB-206ENST00000520497 C11orf42Q8N5U0 333 aa7□□□□□ -1.29
VAPB-206ENST00000520497 LRTM2Q8N967 370 aa7□□□□□ -1.29
VAPB-206ENST00000520497 INO80EQ8NBZ0 244 aaPredicted RBP7□□□□□ -1.29
VAPB-206ENST00000520497 OR8U1Q8NH10 309 aa7□□□□□ -1.29
VAPB-206ENST00000520497 IL22RA2Q969J5 263 aa7□□□□□ -1.29
VAPB-206ENST00000520497 C2orf50Q96LR7 162 aa7□□□□□ -1.29
VAPB-206ENST00000520497 YPEL2Q96QA6 119 aa7□□□□□ -1.29
VAPB-206ENST00000520497 AGMATQ9BSE5 352 aa7□□□□□ -1.29
VAPB-206ENST00000520497 GON7Q9BXV9 100 aa7□□□□□ -1.29
VAPB-206ENST00000520497 TMEM222Q9H0R3 208 aa7□□□□□ -1.29
VAPB-206ENST00000520497 SLA2Q9H6Q3 261 aa7□□□□□ -1.29
VAPB-206ENST00000520497 CCL28Q9NRJ3 127 aa7□□□□□ -1.29
VAPB-206ENST00000520497 GFOD1Q9NXC2 390 aa7□□□□□ -1.29
VAPB-206ENST00000520497 IDI2-AS1Q9NZ38 188 aa7□□□□□ -1.29
VAPB-206ENST00000520497 POLR3KQ9Y2Y1 108 aaPredicted RBP7□□□□□ -1.29
VAPB-206ENST00000520497 HSPB11Q9Y547 144 aa7□□□□□ -1.29
VAPB-206ENST00000520497 TLN2Q9Y4G6 2542 aa7□□□□□ -1.29
VAPB-206ENST00000520497 HIVEP1P15822 2718 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 ZANQ9Y493 2812 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 ZNF469Q96JG9 3925 aaPredicted RBP6.99□□□□□ -1.29
VAPB-206ENST00000520497 PPIAL4CA0A0B4J2A2 164 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 IGHV4-61A0A0C4DH41 118 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 hCG_1809904A0A1W2PP81 198 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 A0A1W2PPE2 198 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 A0A1W2PR64 198 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 A0A1W2PRV1 198 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 SMLR1H3BR10 107 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 CCSO14618 274 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 IGLV2-14P01704 120 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 HOXB5P09067 269 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 PPIAL4GP0DN37 164 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 RPA2P15927 270 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 F2RP25116 425 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 ZFP36P26651 326 aaKnown RBP6.99□□□□□ -1.29
VAPB-206ENST00000520497 GPR12P47775 334 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 TMEM187Q14656 261 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 IAH1Q2TAA2 248 aaPredicted RBP6.99□□□□□ -1.29
VAPB-206ENST00000520497 Q3ZCU0 254 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 UTF1Q5T230 341 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 PRAMEF5Q5TYX0 476 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 DCAF12L2Q5VW00 463 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 ZNF66Q6ZN08 573 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 ZBTB8BQ8NAP8 495 aaPredicted RBP6.99□□□□□ -1.29
VAPB-206ENST00000520497 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.99□□□□□ -1.29
VAPB-206ENST00000520497 ZNF439Q8NDP4 499 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 CD300LFQ8TDQ1 290 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 RBPMSQ93062 196 aaKnown RBP6.99□□□□□ -1.29
VAPB-206ENST00000520497 HSD17B10Q99714 261 aaKnown RBP6.99□□□□□ -1.29
VAPB-206ENST00000520497 OR2D2Q9H210 308 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 PIPOXQ9P0Z9 390 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 PAIP2BQ9ULR5 123 aaKnown RBP6.99□□□□□ -1.29
VAPB-206ENST00000520497 F8P00451 2351 aa6.99□□□□□ -1.29
VAPB-206ENST00000520497 LOC105371242A0A075B767 164 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 A0A087X0M5 115 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 A0A0D9SG52 128 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 A0A1B0GX30 115 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 PGLYRP1O75594 196 aaPredicted RBP6.98□□□□□ -1.29
VAPB-206ENST00000520497 CDS2O95674 445 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 LIPFP07098 398 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 IGHV1-8P0DP01 117 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 SLC25A4P12235 298 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 SLC25A16P16260 332 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 ZNF16P17020 682 aaPredicted RBP6.98□□□□□ -1.29
VAPB-206ENST00000520497 PVALBP20472 110 aaPredicted RBP6.98□□□□□ -1.29
VAPB-206ENST00000520497 UCP1P25874 307 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 PSMB6P28072 239 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 KIR2DS2P43631 304 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 ZNF134P52741 427 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 ERVFRD-1P60508 538 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 LTC4SQ16873 150 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 CLEC12BQ2HXU8 276 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 C2orf68Q2NKX9 166 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 TMEM268Q5VZI3 342 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 GGNBP1Q5YKI7 109 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 C11orf87Q6NUJ2 197 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 SLC25A48Q6ZT89 311 aaKnown RBP6.98□□□□□ -1.29
VAPB-206ENST00000520497 KRTAP1-3Q8IUG1 177 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 C9orf62Q8N4C0 152 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 KIR3DL3Q8N743 410 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 GRPEL2Q8TAA5 225 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 ZNF596Q8TC21 504 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 PPP1R1CQ8WVI7 109 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 RRNAD1Q96FB5 475 aaKnown RBP6.98□□□□□ -1.29
VAPB-206ENST00000520497 ABHD14BQ96IU4 210 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 SEC22AQ96IW7 307 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 ADTRPQ96IZ2 230 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 TMEM56Q96MV1 263 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms