RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 IGKV3D-15A0A087WSY6 115 aa14.97□□□□□ -0.01
NUP54-205ENST00000507257 G3V3Y1 287 aa14.97□□□□□ -0.01
NUP54-205ENST00000507257 UMODP07911 640 aa14.97□□□□□ -0.01
NUP54-205ENST00000507257 YRDCQ86U90 279 aaKnown RBP14.97□□□□□ -0.01
NUP54-205ENST00000507257 TMEM256Q8N2U0 113 aa14.97□□□□□ -0.01
NUP54-205ENST00000507257 CCDC74BQ96LY2 380 aa14.97□□□□□ -0.01
NUP54-205ENST00000507257 MBNL3Q9NUK0 354 aaKnown RBP14.97□□□□□ -0.01
NUP54-205ENST00000507257 CBY1Q9Y3M2 126 aa14.97□□□□□ -0.01
NUP54-205ENST00000507257 LRRC30A6NM36 301 aa14.96□□□□□ -0.01
NUP54-205ENST00000507257 CDC34P49427 236 aaPredicted RBP14.96□□□□□ -0.01
NUP54-205ENST00000507257 TPPP2P59282 170 aa14.96□□□□□ -0.01
NUP54-205ENST00000507257 GNB1P62873 340 aa14.96□□□□□ -0.01
NUP54-205ENST00000507257 CMTM2Q8TAZ6 248 aa14.96□□□□□ -0.01
NUP54-205ENST00000507257 IL1F10Q8WWZ1 152 aa14.96□□□□□ -0.01
NUP54-205ENST00000507257 ZNF552Q9H707 407 aaPredicted RBP14.96□□□□□ -0.01
NUP54-205ENST00000507257 AKIRIN1Q9H9L7 192 aaPredicted RBP14.96□□□□□ -0.01
NUP54-205ENST00000507257 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.96□□□□□ -0.01
NUP54-205ENST00000507257 C1QTNF9BB2RNN3 333 aa14.96□□□□□ -0.02
NUP54-205ENST00000507257 HMGB3O15347 200 aaKnown RBP14.96□□□□□ -0.02
NUP54-205ENST00000507257 GCH1P30793 250 aa14.96□□□□□ -0.02
NUP54-205ENST00000507257 TCTEX1D1Q8N7M0 179 aa14.96□□□□□ -0.02
NUP54-205ENST00000507257 DUSP23Q9BVJ7 150 aa14.96□□□□□ -0.02
NUP54-205ENST00000507257 WIPI2Q9Y4P8 454 aa14.96□□□□□ -0.02
NUP54-205ENST00000507257 WISP2O76076 250 aa14.95□□□□□ -0.02
NUP54-205ENST00000507257 MPLP40238 635 aa14.95□□□□□ -0.02
NUP54-205ENST00000507257 RPL29P47914 159 aaKnown RBP14.95□□□□□ -0.02
NUP54-205ENST00000507257 TPTE2P1Q5T6R2 138 aa14.95□□□□□ -0.02
NUP54-205ENST00000507257 AGBL5Q8NDL9 886 aa14.95□□□□□ -0.02
NUP54-205ENST00000507257 SFRP2Q96HF1 295 aa14.95□□□□□ -0.02
NUP54-205ENST00000507257 OR51B6Q9H340 312 aa14.95□□□□□ -0.02
NUP54-205ENST00000507257 KCNS2Q9ULS6 477 aa14.95□□□□□ -0.02
NUP54-205ENST00000507257 RBM7Q9Y580 266 aaKnown RBP14.95□□□□□ -0.02
NUP54-205ENST00000507257 ZNF705FA8MVS1 300 aaPredicted RBP14.94□□□□□ -0.02
NUP54-205ENST00000507257 ZNF705DP0CH99 300 aaPredicted RBP14.94□□□□□ -0.02
NUP54-205ENST00000507257 ZNF705BP0CI00 300 aaPredicted RBP14.94□□□□□ -0.02
NUP54-205ENST00000507257 SRFP11831 508 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 ARF1P84077 181 aaKnown RBP14.94□□□□□ -0.02
NUP54-205ENST00000507257 IL11RAQ14626 422 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 TRIP6Q15654 476 aaKnown RBP14.94□□□□□ -0.02
NUP54-205ENST00000507257 TMEM183BQ1AE95 376 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 GUSBP11Q6P575 273 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 ZNF645Q8N7E2 425 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 SGMS2Q8NHU3 365 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 CABIN1Q9Y6J0 2220 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 C5orf49A4QMS7 147 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 ANKRD30BLA7E2S9 258 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 J3QT63 122 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 NUPR1O60356 82 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 WDR1O75083 606 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 KRASP01116 189 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 P04436 131 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 ZNF16P17020 682 aaPredicted RBP14.94□□□□□ -0.02
NUP54-205ENST00000507257 ADMP35318 185 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 TFF3Q07654 80 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 EIF4EBP1Q13541 118 aaPredicted RBP14.94□□□□□ -0.02
NUP54-205ENST00000507257 Q8N7P7 452 aa14.94□□□□□ -0.02
NUP54-205ENST00000507257 MDFIC2A0A1B0GVS7 189 aa14.93□□□□□ -0.02
NUP54-205ENST00000507257 RAB29O14966 203 aa14.93□□□□□ -0.02
NUP54-205ENST00000507257 BRS3P32247 399 aa14.93□□□□□ -0.02
NUP54-205ENST00000507257 ZNF705AQ6ZN79 300 aaPredicted RBP14.93□□□□□ -0.02
NUP54-205ENST00000507257 Q8IYB0 196 aa14.93□□□□□ -0.02
NUP54-205ENST00000507257 DTD1Q8TEA8 209 aa14.93□□□□□ -0.02
NUP54-205ENST00000507257 ZNF488Q96MN9 340 aa14.93□□□□□ -0.02
NUP54-205ENST00000507257 NCKAP5O14513 1909 aa14.93□□□□□ -0.02
NUP54-205ENST00000507257 ZNF407Q9C0G0 2248 aa14.93□□□□□ -0.02
NUP54-205ENST00000507257 LY6G6EA0A0G2JKS1 128 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 ODAMA1E959 279 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 MRPL33O75394 65 aaKnown RBP14.92□□□□□ -0.02
NUP54-205ENST00000507257 KLF7O75840 302 aaPredicted RBP14.92□□□□□ -0.02
NUP54-205ENST00000507257 EN2P19622 333 aaPredicted RBP14.92□□□□□ -0.02
NUP54-205ENST00000507257 ARR3P36575 388 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 Q6ZWC4 215 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 OR1L1Q8NH94 360 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 ABHD3Q8WU67 409 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 POM121L2Q96KW2 1035 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 PARD6AQ9NPB6 346 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 WDR83OSQ9Y284 106 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 U3KQA8 63 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 MPDU1O75352 247 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 CLDN14O95500 239 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 IRF2P14316 349 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 PMP22Q01453 160 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 HLA-CQ95604 372 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 SDSLQ96GA7 329 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 WFIKKN1Q96NZ8 548 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 PRRG4Q9BZD6 226 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 CLN8Q9UBY8 286 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 TRAPPC2LQ9UL33 140 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 TP53TG3Q9ULZ0 132 aa14.92□□□□□ -0.02
NUP54-205ENST00000507257 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.91□□□□□ -0.02
NUP54-205ENST00000507257 IFNL4K9M1U5 179 aa14.91□□□□□ -0.02
NUP54-205ENST00000507257 NDUFB4O95168 129 aa14.91□□□□□ -0.02
NUP54-205ENST00000507257 C1QTNF9P0C862 333 aa14.91□□□□□ -0.02
NUP54-205ENST00000507257 CCNOP22674 350 aa14.91□□□□□ -0.02
NUP54-205ENST00000507257 WNT5AP41221 380 aa14.91□□□□□ -0.02
NUP54-205ENST00000507257 LHX2P50458 406 aa14.91□□□□□ -0.02
NUP54-205ENST00000507257 TLE1Q04724 770 aa14.91□□□□□ -0.02
NUP54-205ENST00000507257 Q0VG73 95 aa14.91□□□□□ -0.02
NUP54-205ENST00000507257 CATR1Q13166 79 aa14.91□□□□□ -0.02
NUP54-205ENST00000507257 SLC23A3Q6PIS1 610 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms