RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 RAB5BP61020 215 aa2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 LSM6P62312 80 aaKnown RBP2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 EMX1Q04741 257 aaPredicted RBP2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 SRSF6Q13247 344 aaKnown RBP2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 EIF4EBP1Q13541 118 aaPredicted RBP2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 EBI3Q14213 229 aa2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 SPA17Q15506 151 aa2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 LRRC75BQ2VPJ9 315 aa2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 FAM78BQ5VT40 261 aa2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 KRTAP11-1Q8IUC1 163 aa2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 SGPP2Q8IWX5 399 aa2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 LRRC34Q8IZ02 419 aa2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 RPRMLQ8N4K4 120 aa2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 OR2V1Q8NHB1 315 aa2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 RMI2Q96E14 147 aa2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 ZNF285Q96NJ3 590 aa2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 ZNF286AQ9HBT8 521 aa2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 PCYT1BQ9Y5K3 369 aaPredicted RBP2.34□□□□□ -2.04
TRAPPC13-208ENST00000505553 CDK13Q14004 1512 aaKnown RBP2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 RAPGEF6Q8TEU7 1601 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 ALKQ9UM73 1620 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 IGHV3OR16-8A0A075B7F1 116 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 ZNF729A6NN14 1252 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 DISC1C4P0D8 188 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 CDK2P24941 298 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 HSD11B1P28845 292 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 SNAP25P60880 206 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 HERVK_113P63121 156 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 BIKQ13323 160 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 KRT222Q8N1A0 295 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 UBL4BQ8N7F7 174 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 OR5B17Q8NGF7 314 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 MS4A6EQ96DS6 147 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 SEC22CQ9BRL7 303 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 OR2D2Q9H210 308 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 ZNF586Q9NXT0 402 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 VPS29Q9UBQ0 182 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 ICOSQ9Y6W8 199 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 KIAA1671Q9BY89 1806 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 VWDEQ8N2E2 1590 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 DIP2CQ9Y2E4 1556 aa2.33□□□□□ -2.04
TRAPPC13-208ENST00000505553 MROH2AA6NES4 1674 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 RGS12O14924 1447 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 POLR1AO95602 1720 aaPredicted RBP2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 LRRC9Q6ZRR7 1453 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 SLIT3O75094 1523 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 FAM135AQ9P2D6 1515 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 REREQ9P2R6 1566 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 A0A1B0GV50 99 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 A8MWP4 228 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 C16orf90A8MZG2 172 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 KPNA3O00505 521 aaPredicted RBP2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 MRASO14807 208 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 SULT1B1O43704 296 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 IGKV1D-33P01593 117 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 IGKV1-33P01594 117 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 IGLV3-27P01718 113 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 IGHG2P01859 326 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 TRGV3P03979 118 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 CGB3P0DN86 165 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 CGB7P0DN87 165 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 ZNF708P17019 499 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 ALOX5APP20292 161 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 CD34P28906 385 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 AKR1C2P52895 323 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 OR4D2P58180 307 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 ERVS71-1P61550 626 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 SPIN3Q5JUX0 258 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 TMEM69Q5SWH9 247 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 HIST2H3PS2Q5TEC6 136 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 SPINT4Q6UDR6 99 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 Q6ZQT7 251 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 BPIFB6Q8NFQ5 453 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 ANP32BQ92688 251 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 SCRT1Q9BWW7 348 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 TSSK6Q9BXA6 273 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 DHCR7Q9UBM7 475 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 RPUSD1Q9UJJ7 312 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 PHLDA3Q9Y5J5 127 aa2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 BAZ2AQ9UIF9 1905 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-208ENST00000505553 PLCH2O75038 1416 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 MYO5BQ9ULV0 1848 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 ABCC1P33527 1531 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 ARHGAP5Q13017 1502 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 KDM5CP41229 1560 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 SRCAPQ6ZRS2 3230 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 LRP5O75197 1615 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 ABCA6Q8N139 1617 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 IQGAP1P46940 1657 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 CTTNBP2Q8WZ74 1663 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 ROBO1Q9Y6N7 1651 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 TRBV24-1A0A075B6N3 115 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 LINC00862A6NCI5 91 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 CLDN24A6NM45 220 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 EVPLLA8MZ36 301 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 RPL36A-HNRNPH2H7BZ11 118 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 NSA2O95478 260 aaKnown RBP2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 FSTL3O95633 263 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms