RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 RPS6KB2Q9UBS0 482 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 SHPKQ9UHJ6 478 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 NPATQ14207 1427 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 NCOA1Q15788 1441 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 F5H5P2 479 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 M0R381 172 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 TRAF3IP2O43734 574 aaPredicted RBP3.94□□□□□ -1.78
NIPBL-204ENST00000504430 G6PCP35575 357 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 HSPA9P38646 679 aaKnown RBP3.94□□□□□ -1.78
NIPBL-204ENST00000504430 DAPP51397 102 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 DAD1P61803 113 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 SCGB1D4Q6XE38 83 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 SLC25A45Q8N413 288 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 C1orf54Q8WWF1 131 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 SLC35E1Q96K37 410 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 OR2J1Q9GZK6 312 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 ZDHHC11Q9H8X9 412 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 TRMT112Q9UI30 125 aaKnown RBP3.94□□□□□ -1.78
NIPBL-204ENST00000504430 AMMECR1Q9Y4X0 333 aaPredicted RBP3.94□□□□□ -1.78
NIPBL-204ENST00000504430 PCYT1BQ9Y5K3 369 aaPredicted RBP3.94□□□□□ -1.78
NIPBL-204ENST00000504430 PDS5BQ9NTI5 1447 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 VIRMAQ69YN4 1812 aaKnown RBP3.93□□□□□ -1.78
NIPBL-204ENST00000504430 A0A1B0GX51 115 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 A0A1W2PS18 150 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 OR7C2O60412 319 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 PATE4P0C8F1 98 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 ERVK-16P61578 105 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 C9orf57Q5W0N0 161 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 ZNF589Q86UQ0 364 aaPredicted RBP3.93□□□□□ -1.78
NIPBL-204ENST00000504430 TWIST2Q8WVJ9 160 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 NRTNQ99748 197 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 SCN3BQ9NY72 215 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 CACNG5Q9UF02 275 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 YTHDC2Q9H6S0 1430 aaKnown RBP3.93□□□□□ -1.78
NIPBL-204ENST00000504430 RAPGEF2Q9Y4G8 1499 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 SYNJ1O43426 1573 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 PIKFYVEQ9Y2I7 2098 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 IGKV6D-21A0A0A0MT36 114 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 ZNF253O75346 499 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 FABP3P05413 133 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 TGFBR1P36897 503 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 P2RX1P51575 399 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 MP68P56378 58 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 GRB2P62993 217 aaKnown RBP3.93□□□□□ -1.78
NIPBL-204ENST00000504430 SRPXP78539 464 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 CAV1Q03135 178 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 TMEM241Q24JQ0 296 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 ZNF181Q2M3W8 571 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 NHLRC3Q5JS37 347 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 GLYATL3Q5SZD4 288 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 TET2Q6N021 2002 aaPredicted RBP3.93□□□□□ -1.78
NIPBL-204ENST00000504430 NFE4Q86UQ8 179 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 AURKBQ96GD4 344 aaPredicted RBP3.93□□□□□ -1.78
NIPBL-204ENST00000504430 TSPAN32Q96QS1 320 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 SELENOIQ9C0D9 397 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 GPR84Q9NQS5 396 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 PARP11Q9NR21 331 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 TOMM40O96008 361 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 IGLV2-8P01709 118 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 PSMB3P49720 205 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 TIMM50Q3ZCQ8 353 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 ZNF773Q6PK81 442 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 CEMP1Q6PRD7 247 aaPredicted RBP3.93□□□□□ -1.78
NIPBL-204ENST00000504430 GLIPR1L1Q6UWM5 242 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 LINC01551Q86U37 167 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 ZNF584Q8IVC4 421 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 C1orf174Q8IYL3 243 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 NUP37Q8NFH4 326 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 PLEKHB2Q96CS7 222 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 C19orf24Q9BVV8 132 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 SNHG12Q9BXW3 62 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 ZFP30Q9Y2G7 519 aa3.93□□□□□ -1.78
NIPBL-204ENST00000504430 TRIP11Q15643 1979 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 RIMS1Q86UR5 1692 aaKnown RBP3.92□□□□□ -1.78
NIPBL-204ENST00000504430 TECPR2O15040 1411 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 MYH7P12883 1935 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 IGKV6-21A0A0C4DH24 114 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 A0A1B0GX78 115 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 ODAMA1E959 279 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 TPST1O60507 370 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 ADRA2AP08913 450 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 C1QTNF8P60827 252 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 RPS28P62857 69 aaKnown RBP3.92□□□□□ -1.78
NIPBL-204ENST00000504430 ELOCQ15369 112 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 LYRM7Q5U5X0 104 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 EBLN2Q6P2I7 272 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 TCF23Q7RTU1 214 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 C12orf45Q8N5I9 185 aaPredicted RBP3.92□□□□□ -1.78
NIPBL-204ENST00000504430 ADAT3Q96EY9 351 aaPredicted RBP3.92□□□□□ -1.78
NIPBL-204ENST00000504430 ANAPC13Q9BS18 74 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 NOX3Q9HBY0 568 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 TP73-AS1Q9UF72 201 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 NOS1P29475 1434 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 BCL2L11O43521 198 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 PRSS1P07477 247 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 LINC00596Q86U02 117 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 LMO3Q8TAP4 145 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 TAF15Q92804 592 aaKnown RBP eCLIP3.92□□□□□ -1.78
NIPBL-204ENST00000504430 PDCD10Q9BUL8 212 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms