RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 RIF1Q5UIP0 2472 aaKnown RBP14.84□□□□□ -0.03
HMGXB3-201ENST00000502717 ISLRO14498 428 aa14.83□□□□□ -0.03
HMGXB3-201ENST00000502717 SCCPDHQ8NBX0 429 aa14.83□□□□□ -0.03
HMGXB3-201ENST00000502717 TIMM9Q9Y5J7 89 aa14.83□□□□□ -0.03
HMGXB3-201ENST00000502717 A6NDN8 102 aa14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 FAM90A27PA6NNH2 459 aa14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 C21orf140B9A014 251 aa14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 HPRT1P00492 218 aa14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 CEACAM21Q3KPI0 293 aa14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 CXorf67Q86X51 503 aaPredicted RBP14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 A0A1W2PPE3 182 aa14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 HES1Q14469 280 aa14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 FAM166AQ6J272 317 aa14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 OR10X1Q8NGY0 326 aa14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 ZCCHC14Q8WYQ9 949 aaKnown RBP14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 TRBV9A0A0B4J1U6 114 aa14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 TRAV39A0A0B4J263 110 aa14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 DMRTA1Q5VZB9 504 aa14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 PRR7Q8TB68 274 aa14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 BCL2L2Q92843 193 aaPredicted RBP14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 QTRT1Q9BXR0 403 aaKnown RBP14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 FOXD3Q9UJU5 478 aaPredicted RBP14.83□□□□□ -0.04
HMGXB3-201ENST00000502717 HAND1O96004 215 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 SP1P08047 785 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 PSG4Q00888 419 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 TIMP4Q99727 224 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 TMEM242Q9NWH2 141 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 SCN2AQ99250 2005 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 LDLRAD4O15165 306 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 IGKV3-11P04433 115 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 PMS2CLQ68D20 193 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 FGFRL1Q8N441 504 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 ADTRPQ96IZ2 230 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 DCAF16Q9NXF7 216 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 SOD3P08294 240 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 BARX1Q9HBU1 254 aaPredicted RBP14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 M0R1B8 84 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 BMPR1BO00238 502 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 LIFP15018 202 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 SNAI3Q3KNW1 292 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 OR4A47Q6IF82 309 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 WDR74Q6RFH5 385 aaPredicted RBP14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 OR8I2Q8N0Y5 310 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 GPHA2Q96T91 129 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 NPVFQ9HCQ7 196 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 PLSCR2Q9NRY7 297 aa14.82□□□□□ -0.04
HMGXB3-201ENST00000502717 CTSBP07858 339 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 DNLZQ5SXM8 178 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 SLC23A3Q6PIS1 610 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 DEFB108BQ8NET1 73 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 TMEM170AQ8WVE7 144 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 WDYHV1Q96HA8 205 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 PXMP4Q9Y6I8 212 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 SMPD2O60906 423 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 HIST1H1EP10412 219 aaKnown RBP14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 UCP1P25874 307 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 TMPRSS3P57727 454 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 C12orf54Q6X4T0 127 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 BPIFA4PQ86YQ2 179 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 SFRP2Q96HF1 295 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 C18orf12Q96KH6 178 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 HSPB8Q9UJY1 196 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 GRIFINA4D1Z8 144 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 GAB4Q2WGN9 574 aa14.81□□□□□ -0.04
HMGXB3-201ENST00000502717 TRPM7Q96QT4 1865 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 TRBV24-1A0A075B6N3 115 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 RPL24P83731 157 aaKnown RBP14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 TNFRSF9Q07011 255 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 LRRC75BQ2VPJ9 315 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 SAXO1Q8IYX7 474 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 LYG1Q8N1E2 194 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 FAM89BQ8N5H3 189 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 FOXJ2Q9P0K8 574 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 NPY1RP25929 384 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 LHFPL1Q86WI0 220 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 CNIH1O95406 144 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 MFAP2P55001 183 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 MIEN1Q9BRT3 115 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 SAP30LQ9HAJ7 183 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 MYLKQ15746 1914 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 ZSWIM8A7E2V4 1837 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 IGKV1D-43A0A0B4J1Z2 117 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 CXCL1P09341 107 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 OPRK1P41145 380 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 OR2D3Q8NGH3 330 aa14.8□□□□□ -0.04
HMGXB3-201ENST00000502717 CDIPTO14735 213 aa14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 PPOXP50336 477 aa14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 SUPT4H1P63272 117 aaKnown RBP14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 WFDC1Q9HC57 220 aa14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 OR6C3Q9NZP0 311 aa14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 RNF24Q9Y225 148 aa14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 EFEMP2O95967 443 aa14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 CCL3P10147 92 aa14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 GZMHP20718 246 aa14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 MNX1P50219 401 aaPredicted RBP14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 PLA2G3Q9NZ20 509 aa14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 FTH1P19P0C7X4 201 aa14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 LYL1P12980 280 aa14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 CCL20P78556 96 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms