RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 LDLRAD4O15165 306 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 CNIH1O95406 144 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 HLA-DRB1P01911 266 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 FCGR3AP08637 254 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 OR8U9P0C7N5 309 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 CD36P16671 472 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 FGF9P31371 208 aaPredicted RBP7.19□□□□□ -1.26
HDAC6-232ENST00000489053 MYCNOSP40205 109 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 TMEM50BP56557 158 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 PITPNAQ00169 270 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 RTL8BQ17RB0 113 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 BEAN1Q3B7T3 259 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 CDNFQ49AH0 187 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 KCTD21Q4G0X4 260 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 IDNKQ5T6J7 187 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 SFXN4Q6P4A7 337 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.19□□□□□ -1.26
HDAC6-232ENST00000489053 MAFIPQ8WZ33 124 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 FLYWCH2Q96CP2 140 aaKnown RBP7.19□□□□□ -1.26
HDAC6-232ENST00000489053 CYYR1Q96J86 154 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 HSPB9Q9BQS6 159 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 ST6GALNAC5Q9BVH7 336 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 OR2D2Q9H210 308 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 FBXL15Q9H469 300 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 PLSCR3Q9NRY6 295 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 METTL1Q9UBP6 276 aaKnown RBP7.19□□□□□ -1.26
HDAC6-232ENST00000489053 WSB1Q9Y6I7 421 aa7.19□□□□□ -1.26
HDAC6-232ENST00000489053 FOXI3A8MTJ6 420 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-232ENST00000489053 CCL24O00175 119 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 RRHO14718 337 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 ATP6V0E1O15342 81 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 TNFAIP8O95379 198 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 PRB2P02812 416 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-232ENST00000489053 IGF1P05019 195 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 RPLP1P05386 114 aaKnown RBP7.18□□□□□ -1.26
HDAC6-232ENST00000489053 CTXN2P0C2S0 81 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 GSTT2P0CG29 244 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 GSTT2BP0CG30 244 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 CT45A6P0DMU7 189 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 CT45A5P0DMU8 189 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 CT45A7P0DMV0 189 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 SNRPBP14678 240 aaKnown RBP7.18□□□□□ -1.26
HDAC6-232ENST00000489053 DTYMKP23919 212 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 CNTFRP26992 372 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 SDC2P34741 201 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 ARPC4P59998 168 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 GNB1P62873 340 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 TAGLNQ01995 201 aaKnown RBP7.18□□□□□ -1.26
HDAC6-232ENST00000489053 PLA2G7Q13093 441 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 MOGAT2Q3SYC2 334 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 ZNF660Q6AZW8 331 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-232ENST00000489053 LCNL1Q6ZST4 164 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 PDPNQ86YL7 162 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 CROCCP3Q8IVE0 287 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 MRPL41Q8IXM3 137 aaKnown RBP7.18□□□□□ -1.26
HDAC6-232ENST00000489053 ODF3L1Q8IXM7 274 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 DRAXINQ8NBI3 349 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-232ENST00000489053 WFDC9Q8NEX5 89 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 NPBQ8NG41 125 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 OR5M8Q8NGP6 311 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 LGALS14Q8TCE9 139 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 CLCC1Q96S66 551 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 RNF5Q99942 180 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 PARP12Q9H0J9 701 aaKnown RBP7.18□□□□□ -1.26
HDAC6-232ENST00000489053 OR51E2Q9H255 320 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 SLC35D1Q9NTN3 355 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 RHBDL2Q9NX52 303 aa7.18□□□□□ -1.26
HDAC6-232ENST00000489053 ZNF230Q9UIE0 474 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-232ENST00000489053 A0A087WXM4 84 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 H0YJW9 148 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 RAB27BO00194 218 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 MFNGO00587 321 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 SHOXO15266 292 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 SPDEFO95238 335 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 DIRAS3O95661 229 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 IGHG4P01861 327 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 RRASP10301 218 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 CDX1P47902 265 aaPredicted RBP7.17□□□□□ -1.26
HDAC6-232ENST00000489053 THBS3P49746 956 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 IGSF11Q5DX21 431 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 KPRPQ5T749 579 aaPredicted RBP7.17□□□□□ -1.26
HDAC6-232ENST00000489053 HACD4Q5VWC8 232 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 FOXB2Q5VYV0 432 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 PYHIN1Q6K0P9 492 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 TCTEX1D1Q8N7M0 179 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 LINC00482Q8N8I6 264 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 TSPAN14Q8NG11 270 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 OR5AN1Q8NGI8 311 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 GRPEL2Q8TAA5 225 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 ADTRPQ96IZ2 230 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 HARBI1Q96MB7 349 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 DUX3Q96PT4 197 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 AGMATQ9BSE5 352 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 DCUN1D5Q9BTE7 237 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 CABLES2Q9BTV7 478 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 DIABLOQ9NR28 239 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 ZNF355PQ9NSJ1 428 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 ZNF580Q9UK33 172 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 FOXA2Q9Y261 457 aaPredicted RBP7.17□□□□□ -1.26
HDAC6-232ENST00000489053 VSIG4Q9Y279 399 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms