RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 F2RL2O00254 374 aa11.64□□□□□ -0.55
USP11-207ENST00000478596 FBXO24O75426 580 aa11.64□□□□□ -0.55
USP11-207ENST00000478596 DIRAS3O95661 229 aa11.64□□□□□ -0.55
USP11-207ENST00000478596 HERV-K104P61576 105 aa11.64□□□□□ -0.55
USP11-207ENST00000478596 TSPAN5P62079 268 aa11.64□□□□□ -0.55
USP11-207ENST00000478596 HTD2P86397 168 aa11.64□□□□□ -0.55
USP11-207ENST00000478596 Q6ZS49 121 aa11.64□□□□□ -0.55
USP11-207ENST00000478596 ABHD12Q8N2K0 398 aa11.64□□□□□ -0.55
USP11-207ENST00000478596 OR5AP2Q8NGF4 316 aa11.64□□□□□ -0.55
USP11-207ENST00000478596 OR4C13Q8NGP0 309 aa11.64□□□□□ -0.55
USP11-207ENST00000478596 CABLES2Q9BTV7 478 aa11.64□□□□□ -0.55
USP11-207ENST00000478596 MCUBQ9NWR8 336 aa11.64□□□□□ -0.55
USP11-207ENST00000478596 AMMECR1Q9Y4X0 333 aaPredicted RBP11.64□□□□□ -0.55
USP11-207ENST00000478596 LINC00854A0A1B0GVQ3 168 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 NPIPB11E5RHQ5 1161 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 J3QRK9 145 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 RAB3DO95716 219 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 AKAIN1P0CW23 69 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 OR5H8P0DN80 308 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 VSIG10L2P0DP72 767 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 TBPP20226 339 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 IL3RAP26951 378 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 CEACAM6P40199 344 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 PRRX1P54821 245 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 TMEM17Q86X19 198 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 OR52M1Q8NGK5 317 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 OR9G1Q8NH87 305 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 ZNF596Q8TC21 504 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 EDARADDQ8WWZ3 215 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 ABHD14AQ9BUJ0 271 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 CCDC32Q9BV29 185 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 RANBP3Q9H6Z4 567 aaPredicted RBP11.63□□□□□ -0.55
USP11-207ENST00000478596 ABCB10Q9NRK6 738 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 ANAPC10Q9UM13 185 aa11.63□□□□□ -0.55
USP11-207ENST00000478596 A0A1W2PPE3 182 aa11.62□□□□□ -0.55
USP11-207ENST00000478596 DUS4LO95620 317 aaKnown RBP11.62□□□□□ -0.55
USP11-207ENST00000478596 CD3DP04234 171 aa11.62□□□□□ -0.55
USP11-207ENST00000478596 AMY2AP04746 511 aa11.62□□□□□ -0.55
USP11-207ENST00000478596 CGB3P0DN86 165 aa11.62□□□□□ -0.55
USP11-207ENST00000478596 CGB7P0DN87 165 aa11.62□□□□□ -0.55
USP11-207ENST00000478596 CD28P10747 220 aa11.62□□□□□ -0.55
USP11-207ENST00000478596 NFYAP23511 347 aaPredicted RBP11.62□□□□□ -0.55
USP11-207ENST00000478596 FXYD4P59646 89 aa11.62□□□□□ -0.55
USP11-207ENST00000478596 MEF2DQ14814 521 aa11.62□□□□□ -0.55
USP11-207ENST00000478596 SCGB2B2Q4G0G5 96 aa11.62□□□□□ -0.55
USP11-207ENST00000478596 STEAP1BQ6NZ63 245 aa11.62□□□□□ -0.55
USP11-207ENST00000478596 TMEM229BQ8NBD8 167 aa11.62□□□□□ -0.55
USP11-207ENST00000478596 RCC1LQ96I51 464 aaKnown RBP11.62□□□□□ -0.55
USP11-207ENST00000478596 SOSTQ9BQB4 213 aa11.62□□□□□ -0.55
USP11-207ENST00000478596 RDH8Q9NYR8 311 aa11.62□□□□□ -0.55
USP11-207ENST00000478596 PSG11Q9UQ72 335 aa11.62□□□□□ -0.55
USP11-207ENST00000478596 TRBV6-7A0A0A0MS04 114 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 IGKV1-6A0A0C4DH72 117 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 DISC1C4P0D8 188 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 NPFFO15130 113 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 ST8SIA5O15466 376 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 IL7P13232 177 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 CD40LGP29965 261 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 FCGR2CP31995 323 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 RFX2P48378 723 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 RAB7AP51149 207 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 UBE2E1P51965 193 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 LSAMPQ13449 338 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 FAM53AQ6NSI3 398 aaPredicted RBP11.61□□□□□ -0.55
USP11-207ENST00000478596 FAAP20Q6NZ36 180 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 TOMM40LQ969M1 308 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 TRIM63Q969Q1 353 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 LINC00574Q9H8X3 128 aa11.61□□□□□ -0.55
USP11-207ENST00000478596 ANKRD20A5PA0PJZ0 165 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 CENPXA8MT69 81 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 LANCL1O43813 399 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 YPEL1O60688 119 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 NAT1P18440 290 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 SAA4P35542 130 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 CEACAM3P40198 252 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 GPR12P47775 334 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 PPP5CP53041 499 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 MORN2Q502X0 79 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 OR4C16Q8NGL9 310 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 SECTM1Q8WVN6 248 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 YPEL2Q96QA6 119 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 CITED2Q99967 270 aaPredicted RBP11.6□□□□□ -0.55
USP11-207ENST00000478596 ZNF2Q9BSG1 426 aaPredicted RBP11.6□□□□□ -0.55
USP11-207ENST00000478596 TINAGL1Q9GZM7 467 aaPredicted RBP11.6□□□□□ -0.55
USP11-207ENST00000478596 OR2D2Q9H210 308 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 ZNF107Q9UII5 783 aaPredicted RBP11.6□□□□□ -0.55
USP11-207ENST00000478596 ZNF221Q9UK13 617 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 RBMX2Q9Y388 322 aaKnown RBP11.6□□□□□ -0.55
USP11-207ENST00000478596 CSMD3Q7Z407 3707 aa11.6□□□□□ -0.55
USP11-207ENST00000478596 J3QR06 171 aa11.59□□□□□ -0.55
USP11-207ENST00000478596 SLC31A2O15432 143 aa11.59□□□□□ -0.55
USP11-207ENST00000478596 OR8U9P0C7N5 309 aa11.59□□□□□ -0.55
USP11-207ENST00000478596 PGAM2P15259 253 aa11.59□□□□□ -0.55
USP11-207ENST00000478596 AADACP22760 399 aa11.59□□□□□ -0.55
USP11-207ENST00000478596 HTR1DP28221 377 aa11.59□□□□□ -0.55
USP11-207ENST00000478596 CD34P28906 385 aa11.59□□□□□ -0.55
USP11-207ENST00000478596 LUMP51884 338 aaPredicted RBP11.59□□□□□ -0.55
USP11-207ENST00000478596 ARHGDIBP52566 201 aa11.59□□□□□ -0.55
USP11-207ENST00000478596 DYRK1AQ13627 763 aa11.59□□□□□ -0.55
USP11-207ENST00000478596 BAK1Q16611 211 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms