RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ATP6V0BQ99437 205 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 CCL19Q99731 98 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 SLC30A2Q9BRI3 323 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 FAM192AQ9GZU8 254 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 NAA50Q9GZZ1 169 aaKnown RBP2.87□□□□□ -1.95
UBR3-209ENST00000477461 DCSTAMPQ9H295 470 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 TPK1Q9H3S4 243 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 FN3KRPQ9HA64 309 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 PLGRKTQ9HBL7 147 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 MYEF2Q9P2K5 600 aaKnown RBP2.87□□□□□ -1.95
UBR3-209ENST00000477461 IL19Q9UHD0 177 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 AK6Q9Y3D8 172 aaKnown RBP2.87□□□□□ -1.95
UBR3-209ENST00000477461 V9GY05 133 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 DYSFO75923 2080 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 DOPEY1Q5JWR5 2465 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 ITPR1Q14643 2758 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 CACNA1DQ01668 2161 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 SPTAN1Q13813 2472 aaKnown RBP2.86□□□□□ -1.95
UBR3-209ENST00000477461 FREM2Q5SZK8 3169 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 TRAV8-7A0A075B6U6 113 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 TRAV9-2A0A087WT02 112 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 IGHV3-64DA0A0J9YX35 117 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 PQLC2LA1A4F0 135 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 F5H5P2 479 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 H0YL77 283 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 H3BMQ9 156 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 TRAPPC2LH3BP13 241 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 J3QT63 122 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 ZNF701M0R085 212 aaPredicted RBP2.86□□□□□ -1.95
UBR3-209ENST00000477461 PIN1P1O15428 100 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 IGHV1-46P01743 117 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 SOD3P08294 240 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 UBBP0CG47 229 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 IGFBP3P17936 291 aaPredicted RBP2.86□□□□□ -1.95
UBR3-209ENST00000477461 UCP1P25874 307 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 HTR2CP28335 458 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 CD200P41217 278 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 HAAOP46952 286 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 RORCP51449 518 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 MFAP2P55001 183 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 NCS1P62166 190 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 CCL8P80075 99 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 GPR176Q14439 515 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 RSU1Q15404 277 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 KISS1Q15726 138 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 UBE2V2Q15819 145 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 RAB11BQ15907 218 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 CARTPTQ16568 116 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 DGUOKQ16854 277 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 HFEQ30201 348 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 IDNKQ5T6J7 187 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 HES5Q5TA89 166 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 PRAMEF6Q5VXH4 476 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 TMEM42Q69YG0 159 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 SFXN4Q6P4A7 337 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 HAGHLQ6PII5 290 aaPredicted RBP2.86□□□□□ -1.95
UBR3-209ENST00000477461 Q6ZR03 302 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 SLC25A26Q70HW3 274 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 CDH26Q8IXH8 852 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 OR51A2Q8NGJ7 313 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 OR5D18Q8NGL1 313 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 OR51F2Q8NH61 342 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 NDNFQ8TB73 568 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 TNFAIP8L1Q8WVP5 186 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 AP3S1Q92572 193 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 TIMD4Q96H15 378 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 SPACA5Q96QH8 159 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 UQCC2Q9BRT2 126 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 DCUN1D5Q9BTE7 237 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 PKIBQ9C010 78 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 CST11Q9H112 138 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 METTL9Q9H1A3 318 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 RNF167Q9H6Y7 350 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 METTL17Q9H7H0 456 aaPredicted RBP2.86□□□□□ -1.95
UBR3-209ENST00000477461 UFSP2Q9NUQ7 469 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 C1orf123Q9NWV4 160 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 ING4Q9UNL4 249 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 POLDIP2Q9Y2S7 368 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 WDFY3Q8IZQ1 3526 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 MYO18BQ8IUG5 2567 aa2.86□□□□□ -1.95
UBR3-209ENST00000477461 TANC2Q9HCD6 1990 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 PRRC2CQ9Y520 2896 aaKnown RBP2.85□□□□□ -1.95
UBR3-209ENST00000477461 IGKV1-27A0A075B6S5 117 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 IGKV1-9A0A0C4DH69 117 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 IGHV1-69-2A0A0G2JMI3 117 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 ISPDA4D126 451 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 METTL21EPA6NDL7 271 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 IFITM5A6NNB3 132 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 FAM25AB3EWG3 89 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 FAM25CB3EWG5 89 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 FAM25GB3EWG6 89 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 CLDN25C9JDP6 229 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 H7C417 338 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 AIPO00170 330 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 SLC17A2O00624 439 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 CDIPTO14735 213 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 RGS5O15539 181 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 SYNGR1O43759 233 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 ANGPTL7O43827 346 aa2.85□□□□□ -1.95
UBR3-209ENST00000477461 ZNF780AO75290 641 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms