RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 SHISA2Q6UWI4 295 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 Q6ZSV7 163 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 H1FOOQ8IZA3 346 aaPredicted RBP6.86□□□□□ -1.31
SSBP1-208ENST00000469123 CADM3Q8N126 398 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 BEST4Q8NFU0 473 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 OR56B4Q8NH76 319 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 DYNC2LI1Q8TCX1 351 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 CFHR4Q92496 578 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 BORCS5Q969J3 196 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 ADTRPQ96IZ2 230 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 RNF5Q99942 180 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 SLC25A33Q9BSK2 321 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 ZNF747Q9BV97 191 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 C11orf54Q9H0W9 315 aaPredicted RBP6.86□□□□□ -1.31
SSBP1-208ENST00000469123 NECAP2Q9NVZ3 263 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 OR1A1Q9P1Q5 309 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 RSL24D1Q9UHA3 163 aaKnown RBP6.86□□□□□ -1.31
SSBP1-208ENST00000469123 ZNF230Q9UIE0 474 aaPredicted RBP6.86□□□□□ -1.31
SSBP1-208ENST00000469123 ANAPC10Q9UM13 185 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 RBM7Q9Y580 266 aaKnown RBP6.86□□□□□ -1.31
SSBP1-208ENST00000469123 A3GALT2U3KPV4 340 aa6.86□□□□□ -1.31
SSBP1-208ENST00000469123 IGKV1-6A0A0C4DH72 117 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 A0A1B0GVG6 124 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 CCDC160A6NGH7 325 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 ST8SIA5O15466 376 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 RGS5O15539 181 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 CHST1O43916 411 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 SSX5O60225 188 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 HPGDSO60760 199 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 IGKV1D-33P01593 117 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 IGKV1-33P01594 117 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 APOA2P02652 100 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 EIF4EP06730 217 aaKnown RBP6.85□□□□□ -1.31
SSBP1-208ENST00000469123 RRASP10301 218 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 ACTBP60709 375 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 RELBQ01201 579 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 SSBP1Q04837 148 aaKnown RBP6.85□□□□□ -1.31
SSBP1-208ENST00000469123 ACTBL2Q562R1 376 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 IGSF11Q5DX21 431 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 TMEM219Q86XT9 240 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 ODF3L1Q8IXM7 274 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 OR5AP2Q8NGF4 316 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 LINC01006Q8NI28 216 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 ZNF107Q9UII5 783 aaPredicted RBP6.85□□□□□ -1.31
SSBP1-208ENST00000469123 OR2W1Q9Y3N9 320 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 RNF114Q9Y508 228 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 CEPT1Q9Y6K0 416 aa6.85□□□□□ -1.31
SSBP1-208ENST00000469123 KCNAB3O43448 404 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 OR5H8P0DN80 308 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 ELK1P19419 428 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 TBPP20226 339 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 PAX6P26367 422 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 RCVRNP35243 200 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 REG1BP48304 166 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 LUMP51884 338 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-208ENST00000469123 PROK1P58294 105 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 DIAPH2-AS1Q14236 149 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 CDK10Q15131 360 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 ARSJQ5FYB0 599 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-208ENST00000469123 PDPNQ86YL7 162 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 Q8N6K4 173 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 ZNF645Q8N7E2 425 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 ZBTB34Q8NCN2 500 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 OR5AN1Q8NGI8 311 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 GPX8Q8TED1 209 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 MAFIPQ8WZ33 124 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 CYYR1Q96J86 154 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 EAF1Q96JC9 268 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-208ENST00000469123 NABP2Q9BQ15 211 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 ZNF251Q9BRH9 671 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 MRPL20Q9BYC9 149 aaKnown RBP6.84□□□□□ -1.31
SSBP1-208ENST00000469123 OR2D2Q9H210 308 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 LIN7CQ9NUP9 197 aaKnown RBP6.84□□□□□ -1.31
SSBP1-208ENST00000469123 EXTL2Q9UBQ6 330 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 ELF5Q9UKW6 265 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-208ENST00000469123 WASHC3Q9Y3C0 194 aa6.84□□□□□ -1.31
SSBP1-208ENST00000469123 TUSC2O75896 110 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 SPDEFO95238 335 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 HLA-DQB1P01920 261 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 OR8U9P0C7N5 309 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 MDKP21741 143 aaPredicted RBP6.83□□□□□ -1.32
SSBP1-208ENST00000469123 VDAC2P45880 294 aaPredicted RBP6.83□□□□□ -1.32
SSBP1-208ENST00000469123 OR3A3P47888 321 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 THBS3P49746 956 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 RTL8BQ17RB0 113 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 PYHIN1Q6K0P9 492 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 FAM53AQ6NSI3 398 aaPredicted RBP6.83□□□□□ -1.32
SSBP1-208ENST00000469123 FAM122CQ6P4D5 195 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 Q6ZNX1 250 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 C5orf56Q8N8D9 126 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 OR5H2Q8NGV7 314 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 OR8U1Q8NH10 309 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 SGMS2Q8NHU3 365 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 WFDC12Q8WWY7 111 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 DGCR14Q96DF8 476 aaKnown RBP6.83□□□□□ -1.32
SSBP1-208ENST00000469123 HSD17B10Q99714 261 aaKnown RBP6.83□□□□□ -1.32
SSBP1-208ENST00000469123 RASL11BQ9BPW5 248 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 GON7Q9BXV9 100 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 SLIRPQ9GZT3 109 aaKnown RBP6.83□□□□□ -1.32
SSBP1-208ENST00000469123 C6orf62Q9GZU0 229 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms