RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 CTRLP40313 264 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 CXCL5P42830 114 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 RPL5P46777 297 aaKnown RBP2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 ZNF138P52744 262 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 SLC18A1P54219 525 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 TCTAP57738 103 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 HBG1P69891 147 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 HBG2P69892 147 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 TNFRSF9Q07011 255 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 EIF4EBP2Q13542 120 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR1Q1Q15612 314 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 BATFQ16520 125 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 CCDC58Q4VC31 144 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 ORMDL2Q53FV1 153 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 BRMS1LQ5PSV4 323 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 C1orf195Q5TG92 126 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 TMEM215Q68D42 235 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 LAMTOR1Q6IAA8 161 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 XKRXQ6PP77 449 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 EPGNQ6UW88 154 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 Q6ZVH6 145 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 SLC36A1Q7Z2H8 476 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 GLT6D1Q7Z4J2 308 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 FAM19A5Q7Z5A7 132 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 DEFB119Q8N690 84 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 Q8N9W7 124 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR1M1Q8NGA1 313 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR6K3Q8NGY3 331 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR13G1Q8NGZ3 307 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR2V1Q8NHB1 315 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 TNFAIP8L1Q8WVP5 186 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 TMEM158Q8WZ71 300 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 TMEM159Q96B96 161 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 TM4SF18Q96CE8 201 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 TSC22D3Q99576 134 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 CMSS1Q9BQ75 279 aaKnown RBP2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 DDA1Q9BW61 102 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 YTHDF1Q9BYJ9 559 aaKnown RBP2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 TPK1Q9H3S4 243 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 POMKQ9H5K3 350 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 PARVBQ9HBI1 364 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 MMP26Q9NRE1 261 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 SPANXA1Q9NS26 97 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 BTRCQ9Y297 605 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 SIGLEC9Q9Y336 463 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 FAM32AQ9Y421 112 aaKnown RBP2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 TRIOO75962 3097 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 LRP4O75096 1905 aa2.65□□□□□ -1.99
HMGB1P25-201ENST00000468402 TGIF2-C20orf24A0A0A6YYL0 155 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 A0A0G2JMP0 313 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 EFCAB10A6NFE3 127 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 SMIM9A6NGZ8 99 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 MFNGO00587 321 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 REM1O75628 298 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 ARL6IP5O75915 188 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 SLC25A14O95258 325 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 IGLV3-27P01718 113 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 LINC00614P0C842 121 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 CBR1P16152 277 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 S100GP29377 79 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 AGTR1P30556 359 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 DRD3P35462 400 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 MYCNOSP40205 109 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 PSMD8P48556 350 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 PRDX1Q06830 199 aaKnown RBP2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 ERCC8Q13216 396 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR2F1Q13607 317 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 PMVKQ15126 192 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 PRSS8Q16651 343 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 C4orf26Q17RF5 130 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 CCDC153Q494R4 210 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 TMEM97Q5BJF2 176 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 TNFAIP8L3Q5GJ75 292 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 TTC32Q5I0X7 151 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 FAM78AQ5JUQ0 283 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 SPANXN3Q5MJ09 141 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 OTPQ5XKR4 325 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 STEAP4Q687X5 459 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 FAM71E1Q6IPT2 247 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 DHRS4L2Q6PKH6 230 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 FBXW12Q6X9E4 464 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 DGAT2L6Q6ZPD8 337 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 DPPA2Q7Z7J5 298 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 LYG2Q86SG7 212 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 GALNT10Q86SR1 603 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 LRRC25Q8N386 305 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 RNF175Q8N4F7 328 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 GATD1Q8NB37 220 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR4M2Q8NGB6 313 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR4C13Q8NGP0 309 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 BLNKQ8WV28 456 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 C10orf82Q8WW14 230 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 ASB17Q8WXJ9 295 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 TCEAL3Q969E4 200 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 IMMP1LQ96LU5 166 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 METTL26Q96S19 204 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 TIMM17AQ99595 171 aa2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 HOPXQ9BPY8 73 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 ZNF2Q9BSG1 426 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P25-201ENST00000468402 PARP12Q9H0J9 701 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms