RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 TIMM23O14925 209 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 PROP1O75360 226 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 RAB3DO95716 219 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 IGHV4-59P01825 116 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 IFNA6P05013 189 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 IGKV1-13P0DP09 117 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 PAX6P26367 422 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 REG1BP48304 166 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 HERV-K104P61576 105 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 TSPAN5P62079 268 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 SLC9A3R2Q15599 337 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 RPL39P5Q59GN2 51 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 LIAT1Q6ZQX7 453 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 THNSL2Q86YJ6 484 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 BORCS5Q969J3 196 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 SDHCQ99643 169 aaPredicted RBP12.87□□□□□ -0.35
GPC1-207ENST00000466624 NABP2Q9BQ15 211 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 TINAGL1Q9GZM7 467 aaPredicted RBP12.87□□□□□ -0.35
GPC1-207ENST00000466624 ESM1Q9NQ30 184 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 SDHAF2Q9NX18 166 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 PITPNC1Q9UKF7 332 aa12.87□□□□□ -0.35
GPC1-207ENST00000466624 RNASE1P07998 156 aaKnown RBP12.86□□□□□ -0.35
GPC1-207ENST00000466624 CD1BP29016 333 aa12.86□□□□□ -0.35
GPC1-207ENST00000466624 CD40LGP29965 261 aa12.86□□□□□ -0.35
GPC1-207ENST00000466624 KLF9Q13886 244 aaPredicted RBP12.86□□□□□ -0.35
GPC1-207ENST00000466624 LHFPL1Q86WI0 220 aa12.86□□□□□ -0.35
GPC1-207ENST00000466624 TOMM5Q8N4H5 51 aa12.86□□□□□ -0.35
GPC1-207ENST00000466624 ZBTB34Q8NCN2 500 aa12.86□□□□□ -0.35
GPC1-207ENST00000466624 OR4C16Q8NGL9 310 aa12.86□□□□□ -0.35
GPC1-207ENST00000466624 CCDC32Q9BV29 185 aa12.86□□□□□ -0.35
GPC1-207ENST00000466624 WDR12Q9GZL7 423 aaKnown RBP12.86□□□□□ -0.35
GPC1-207ENST00000466624 VPREB3Q9UKI3 123 aa12.86□□□□□ -0.35
GPC1-207ENST00000466624 TCF19Q9Y242 345 aa12.86□□□□□ -0.35
GPC1-207ENST00000466624 NF1P21359 2839 aa12.86□□□□□ -0.35
GPC1-207ENST00000466624 DISC1C4P0D8 188 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 VENTXO95231 258 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 IGLV2-14P01704 120 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 ZNF735P0CB33 412 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 CT45A6P0DMU7 189 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 CT45A5P0DMU8 189 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 CT45A7P0DMV0 189 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 FAUP35544 74 aaKnown RBP12.85□□□□□ -0.35
GPC1-207ENST00000466624 PPP5CP53041 499 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 UCP3P55916 312 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 RPL15P61313 204 aaKnown RBP12.85□□□□□ -0.35
GPC1-207ENST00000466624 UBA52P62987 128 aaKnown RBP12.85□□□□□ -0.35
GPC1-207ENST00000466624 LSAMPQ13449 338 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 EBI3Q14213 229 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 BAK1Q16611 211 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 TRIQKQ629K1 86 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 LPCAT3Q6P1A2 487 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 MOB3BQ86TA1 216 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 DRAM1Q8N682 238 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 OR4D10Q8NGI6 311 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 OR56B4Q8NH76 319 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 ZFAND2BQ8WV99 257 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 AKR1E2Q96JD6 320 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 MRPL20Q9BYC9 149 aaKnown RBP12.85□□□□□ -0.35
GPC1-207ENST00000466624 FXYD6Q9H0Q3 95 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 SLC2A8Q9NY64 477 aa12.85□□□□□ -0.35
GPC1-207ENST00000466624 JMJD1CQ15652 2540 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 A6NDX4 124 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 OR5H14A6NHG9 310 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 TRIM77I1YAP6 450 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 J3QRK9 145 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 M0R1X1 148 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 AMY2AP04746 511 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 FAM106CPP0CH98 169 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 MC5RP33032 325 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 RAB13P51153 203 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 FXYD4P59646 89 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 TAGLNQ01995 201 aaKnown RBP12.84□□□□□ -0.35
GPC1-207ENST00000466624 ZNF846Q147U1 533 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 AADACL3Q5VUY0 350 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 OR5AN1Q8NGI8 311 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 SECTM1Q8WVN6 248 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 C5orf30Q96GV9 206 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 ADTRPQ96IZ2 230 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 PRRT1Q99946 306 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 SLC5A7Q9GZV3 580 aa12.84□□□□□ -0.35
GPC1-207ENST00000466624 SNRNP70P08621 437 aaKnown RBP12.83□□□□□ -0.36
GPC1-207ENST00000466624 IL7P13232 177 aa12.83□□□□□ -0.36
GPC1-207ENST00000466624 DUTP33316 252 aaKnown RBP12.83□□□□□ -0.36
GPC1-207ENST00000466624 ECI1P42126 302 aa12.83□□□□□ -0.36
GPC1-207ENST00000466624 INPP1P49441 399 aa12.83□□□□□ -0.36
GPC1-207ENST00000466624 THBS3P49746 956 aa12.83□□□□□ -0.36
GPC1-207ENST00000466624 RIPPLY3P57055 190 aa12.83□□□□□ -0.36
GPC1-207ENST00000466624 EIF4EBP1Q13541 118 aaPredicted RBP12.83□□□□□ -0.36
GPC1-207ENST00000466624 C16orf82Q7Z2V1 217 aa12.83□□□□□ -0.36
GPC1-207ENST00000466624 PRIMA1Q86XR5 153 aa12.83□□□□□ -0.36
GPC1-207ENST00000466624 TERB2Q8NHR7 220 aa12.83□□□□□ -0.36
GPC1-207ENST00000466624 CAPSLQ8WWF8 208 aa12.83□□□□□ -0.36
GPC1-207ENST00000466624 CHIAQ9BZP6 476 aa12.83□□□□□ -0.36
GPC1-207ENST00000466624 RAB18Q9NP72 206 aa12.83□□□□□ -0.36
GPC1-207ENST00000466624 CCL28Q9NRJ3 127 aa12.83□□□□□ -0.36
GPC1-207ENST00000466624 H0YJW9 148 aa12.82□□□□□ -0.36
GPC1-207ENST00000466624 GNRHRP30968 328 aa12.82□□□□□ -0.36
GPC1-207ENST00000466624 ZNF57Q68EA5 555 aaPredicted RBP12.82□□□□□ -0.36
GPC1-207ENST00000466624 FAAP20Q6NZ36 180 aa12.82□□□□□ -0.36
GPC1-207ENST00000466624 C16orf87Q6PH81 154 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms