RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 MRPL48Q96GC5 212 aaKnown RBP12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 ABHD14BQ96IU4 210 aa12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 AGMATQ9BSE5 352 aa12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 ZC4H2Q9NQZ6 224 aa12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 OAZ3Q9UMX2 235 aa12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 GLAP06280 429 aa12.88□□□□□ -0.35
UBE2D4-209ENST00000454428 GABRB1P18505 474 aa12.88□□□□□ -0.35
UBE2D4-209ENST00000454428 FUT3P21217 361 aa12.88□□□□□ -0.35
UBE2D4-209ENST00000454428 AADACP22760 399 aa12.88□□□□□ -0.35
UBE2D4-209ENST00000454428 FASP25445 335 aa12.88□□□□□ -0.35
UBE2D4-209ENST00000454428 PJVKQ0ZLH3 352 aa12.88□□□□□ -0.35
UBE2D4-209ENST00000454428 GPR176Q14439 515 aa12.88□□□□□ -0.35
UBE2D4-209ENST00000454428 TATDN3Q17R31 274 aa12.88□□□□□ -0.35
UBE2D4-209ENST00000454428 GLIPR1L1Q6UWM5 242 aa12.88□□□□□ -0.35
UBE2D4-209ENST00000454428 OR13C5Q8NGS8 318 aa12.88□□□□□ -0.35
UBE2D4-209ENST00000454428 Q96M66 194 aa12.88□□□□□ -0.35
UBE2D4-209ENST00000454428 SELENOIQ9C0D9 397 aa12.88□□□□□ -0.35
UBE2D4-209ENST00000454428 PEMTQ9UBM1 199 aa12.88□□□□□ -0.35
UBE2D4-209ENST00000454428 TRAV8-7A0A075B6U6 113 aa12.87□□□□□ -0.35
UBE2D4-209ENST00000454428 FAM90A7PA6NKC0 464 aa12.87□□□□□ -0.35
UBE2D4-209ENST00000454428 FAM90A23PA8MXZ1 464 aa12.87□□□□□ -0.35
UBE2D4-209ENST00000454428 H3BNX3 289 aa12.87□□□□□ -0.35
UBE2D4-209ENST00000454428 BMPR1BO00238 502 aa12.87□□□□□ -0.35
UBE2D4-209ENST00000454428 GPX5O75715 221 aa12.87□□□□□ -0.35
UBE2D4-209ENST00000454428 SPDEFO95238 335 aa12.87□□□□□ -0.35
UBE2D4-209ENST00000454428 BAG2O95816 211 aa12.87□□□□□ -0.35
UBE2D4-209ENST00000454428 RIPK1Q13546 671 aa12.87□□□□□ -0.35
UBE2D4-209ENST00000454428 DRAXINQ8NBI3 349 aaPredicted RBP12.87□□□□□ -0.35
UBE2D4-209ENST00000454428 SLC7A6OSQ96CW6 309 aaPredicted RBP12.87□□□□□ -0.35
UBE2D4-209ENST00000454428 WDR89Q96FK6 387 aaPredicted RBP12.87□□□□□ -0.35
UBE2D4-209ENST00000454428 AIREO43918 545 aa12.86□□□□□ -0.35
UBE2D4-209ENST00000454428 LIMS3P0CW19 117 aa12.86□□□□□ -0.35
UBE2D4-209ENST00000454428 LIMS4P0CW20 117 aa12.86□□□□□ -0.35
UBE2D4-209ENST00000454428 MGMTP16455 207 aa12.86□□□□□ -0.35
UBE2D4-209ENST00000454428 LGALS9CQ6DKI2 356 aa12.86□□□□□ -0.35
UBE2D4-209ENST00000454428 ZNF383Q8NA42 475 aa12.86□□□□□ -0.35
UBE2D4-209ENST00000454428 AMBNQ9NP70 447 aa12.86□□□□□ -0.35
UBE2D4-209ENST00000454428 GYG2O15488 501 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 PDCD6O75340 191 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 IGLV2-23P01705 113 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 CRYGBP07316 175 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 TNFRSF9Q07011 255 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 GUCA2BQ16661 112 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 MRGPRG-AS1Q2M3A8 158 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 DNAL1Q4LDG9 190 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 OR52I1Q8NGK6 324 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 IL1F10Q8WWZ1 152 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 SNAPC3Q92966 411 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 USMG5Q96IX5 58 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 MYCBPQ99417 103 aaPredicted RBP12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 TSNAXQ99598 290 aaKnown RBP12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 SULT4A1Q9BR01 284 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 GGTLC1Q9BX51 225 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 STEAP1Q9UHE8 339 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 LRRC42Q9Y546 428 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 AP4S1Q9Y587 144 aa12.85□□□□□ -0.35
UBE2D4-209ENST00000454428 TRBV5-5A0A0J9YX44 114 aa12.84□□□□□ -0.35
UBE2D4-209ENST00000454428 MSGN1A6NI15 193 aa12.84□□□□□ -0.35
UBE2D4-209ENST00000454428 CPEP16870 476 aa12.84□□□□□ -0.35
UBE2D4-209ENST00000454428 KIR2DS2P43631 304 aa12.84□□□□□ -0.35
UBE2D4-209ENST00000454428 RPS16P62249 146 aaKnown RBP12.84□□□□□ -0.35
UBE2D4-209ENST00000454428 AWAT2Q6E213 333 aa12.84□□□□□ -0.35
UBE2D4-209ENST00000454428 RPL22L1Q6P5R6 122 aaKnown RBP12.84□□□□□ -0.35
UBE2D4-209ENST00000454428 LYG2Q86SG7 212 aa12.84□□□□□ -0.35
UBE2D4-209ENST00000454428 WFDC3Q8IUB2 231 aa12.84□□□□□ -0.35
UBE2D4-209ENST00000454428 DMRT1Q9Y5R6 373 aa12.84□□□□□ -0.35
UBE2D4-209ENST00000454428 SELENOKQ9Y6D0 94 aa12.84□□□□□ -0.35
UBE2D4-209ENST00000454428 C2orf70A6NJV1 201 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 SAC3D1A6NKF1 404 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 ITGB1BP1O14713 200 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 CRTAPO75718 401 aaPredicted RBP12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 ALPLP05186 524 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 RPS11P62280 158 aaKnown RBP eCLIP12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 PRR20EP86478 221 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 PRR20CP86479 221 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 PRR20DP86480 221 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 PRR20BP86481 221 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 PRR20AP86496 221 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 CCDC58Q4VC31 144 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 ZNF880Q6PDB4 577 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 SVOPQ8N4V2 548 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 JAGN1Q8N5M9 183 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 CCDC197Q8NCU1 140 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 ADAD2Q8NCV1 583 aaKnown RBP12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 DYNLRB2Q8TF09 96 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 TMEM68Q96MH6 324 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 C11orf54Q9H0W9 315 aaPredicted RBP12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 COA4Q9NYJ1 87 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 ZNF230Q9UIE0 474 aaPredicted RBP12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 KLK5Q9Y337 293 aaPredicted RBP12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 HSPG2P98160 4391 aa12.83□□□□□ -0.36
UBE2D4-209ENST00000454428 SNTNA6NMZ2 147 aa12.82□□□□□ -0.36
UBE2D4-209ENST00000454428 APELAP0DMC3 54 aa12.82□□□□□ -0.36
UBE2D4-209ENST00000454428 FOLR2P14207 255 aa12.82□□□□□ -0.36
UBE2D4-209ENST00000454428 ZNF45Q02386 682 aa12.82□□□□□ -0.36
UBE2D4-209ENST00000454428 CENPNQ96H22 339 aaPredicted RBP12.82□□□□□ -0.36
UBE2D4-209ENST00000454428 AKIP1Q9NQ31 210 aa12.82□□□□□ -0.36
UBE2D4-209ENST00000454428 MRPS18AQ9NVS2 196 aaKnown RBP12.82□□□□□ -0.36
UBE2D4-209ENST00000454428 ABRACLQ9P1F3 81 aa12.82□□□□□ -0.36
UBE2D4-209ENST00000454428 OR1A1Q9P1Q5 309 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms