RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 COX11Q9Y6N1 276 aa14.28□□□□□ -0.12
PMS1-213ENST00000441310 IGKV1-27A0A075B6S5 117 aa14.27□□□□□ -0.12
PMS1-213ENST00000441310 DEFA4P12838 97 aa14.27□□□□□ -0.12
PMS1-213ENST00000441310 MPLP40238 635 aa14.27□□□□□ -0.12
PMS1-213ENST00000441310 LRRC75BQ2VPJ9 315 aa14.27□□□□□ -0.12
PMS1-213ENST00000441310 FBLN7Q53RD9 439 aa14.27□□□□□ -0.12
PMS1-213ENST00000441310 SAXO1Q8IYX7 474 aa14.27□□□□□ -0.12
PMS1-213ENST00000441310 REPIN1Q9BWE0 567 aaKnown RBP14.27□□□□□ -0.12
PMS1-213ENST00000441310 CER1O95813 267 aa14.27□□□□□ -0.13
PMS1-213ENST00000441310 WNT2P09544 360 aa14.27□□□□□ -0.13
PMS1-213ENST00000441310 OTX2P32243 289 aa14.27□□□□□ -0.13
PMS1-213ENST00000441310 IL11RAQ14626 422 aa14.27□□□□□ -0.13
PMS1-213ENST00000441310 TMEM144Q7Z5S9 345 aa14.27□□□□□ -0.13
PMS1-213ENST00000441310 PINX1Q96BK5 328 aaKnown RBP14.27□□□□□ -0.13
PMS1-213ENST00000441310 NEIL1Q96FI4 390 aaPredicted RBP14.27□□□□□ -0.13
PMS1-213ENST00000441310 ELOVL5Q9NYP7 299 aa14.27□□□□□ -0.13
PMS1-213ENST00000441310 CHCHD2Q9Y6H1 151 aaPredicted RBP14.27□□□□□ -0.13
PMS1-213ENST00000441310 SERPINA7P05543 415 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 NPPCP23582 126 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 SIGLECL1Q8N7X8 197 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 OR51H1Q8NH63 302 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 MRGPRDQ8TDS7 321 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 ARRDC1-AS1Q9H2J1 176 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 CLEC18AA5D8T8 446 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 UCP1P25874 307 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 SPANXN5Q5MJ07 72 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 TMEM105Q8N8V8 129 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 CLEC18CQ8NCF0 446 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 WDR61Q9GZS3 305 aaKnown RBP14.26□□□□□ -0.13
PMS1-213ENST00000441310 ZNF816-ZNF321PA0A0X1KG74 233 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 OR7C1O76099 320 aaPredicted RBP14.26□□□□□ -0.13
PMS1-213ENST00000441310 IGLC2P0DOY2 106 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 IGLC3P0DOY3 106 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 MALLQ13021 153 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 LINC01551Q86U37 167 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 NUDT10Q8NFP7 164 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 DERL1Q9BUN8 251 aa14.26□□□□□ -0.13
PMS1-213ENST00000441310 IGKV1-12A0A0C4DH73 117 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 NTN3O00634 580 aaPredicted RBP14.25□□□□□ -0.13
PMS1-213ENST00000441310 IGKV1D-12P01611 117 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 LHX2P50458 406 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 ACSM6Q6P461 480 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 C1orf174Q8IYL3 243 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 ATOH7Q8N100 152 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 RAB40CQ96S21 281 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 WNT10AQ9GZT5 417 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 ALKBH4Q9NXW9 302 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 IGHV1-45A0A0A0MS14 117 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 TOMM40O96008 361 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 COX6A1P12074 109 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 RAET1LQ5VY80 246 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 Q6ZRM9 215 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 OSR2Q8N2R0 312 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 TAF15Q92804 592 aaKnown RBP eCLIP14.25□□□□□ -0.13
PMS1-213ENST00000441310 RNF2Q99496 336 aa14.25□□□□□ -0.13
PMS1-213ENST00000441310 A0A1W2PN81 502 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 HS3ST1O14792 307 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 CTRLP40313 264 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 SUMO3P55854 103 aaPredicted RBP14.24□□□□□ -0.13
PMS1-213ENST00000441310 VAMP3Q15836 100 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 LDLRAD2Q5SZI1 272 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 ZNF114Q8NC26 417 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 ZNF586Q9NXT0 402 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 MAP1BP46821 2468 aaKnown RBP14.24□□□□□ -0.13
PMS1-213ENST00000441310 DNAJC13O75165 2243 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 DIDO1Q9BTC0 2240 aaKnown RBP14.24□□□□□ -0.13
PMS1-213ENST00000441310 VENTXO95231 258 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 SCTP09683 121 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 DUSP3P51452 185 aaPredicted RBP14.24□□□□□ -0.13
PMS1-213ENST00000441310 UBE2G2P60604 165 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 HBG1P69891 147 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 HBG2P69892 147 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 SNAI3Q3KNW1 292 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 SLC25A47Q6Q0C1 308 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 ZDHHC23Q8IYP9 409 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 BORCS8Q96FH0 119 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 LOXL4Q96JB6 756 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 MRPL18Q9H0U6 180 aaKnown RBP14.24□□□□□ -0.13
PMS1-213ENST00000441310 CACNG5Q9UF02 275 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 C11orf94C9JXX5 98 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 SYNGR4O95473 234 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 GCNT2Q8N0V5 402 aa14.24□□□□□ -0.13
PMS1-213ENST00000441310 NPIPB13A6NJU9 1138 aa14.23□□□□□ -0.13
PMS1-213ENST00000441310 SLC22A20A6NK97 555 aa14.23□□□□□ -0.13
PMS1-213ENST00000441310 NPIPB4C9JG80 1138 aa14.23□□□□□ -0.13
PMS1-213ENST00000441310 SYNGR2O43760 224 aa14.23□□□□□ -0.13
PMS1-213ENST00000441310 NAPSAO96009 420 aa14.23□□□□□ -0.13
PMS1-213ENST00000441310 RPS19BP1Q86WX3 136 aaKnown RBP14.23□□□□□ -0.13
PMS1-213ENST00000441310 Q8N976 141 aa14.23□□□□□ -0.13
PMS1-213ENST00000441310 IMMP1LQ96LU5 166 aa14.23□□□□□ -0.13
PMS1-213ENST00000441310 OR6C6A6NF89 314 aa14.23□□□□□ -0.13
PMS1-213ENST00000441310 PDCD6O75340 191 aa14.23□□□□□ -0.13
PMS1-213ENST00000441310 PMCHP20382 165 aa14.23□□□□□ -0.13
PMS1-213ENST00000441310 THBS3P49746 956 aa14.23□□□□□ -0.13
PMS1-213ENST00000441310 OR10G9Q8NGN4 311 aa14.23□□□□□ -0.13
PMS1-213ENST00000441310 OR10G7Q8NGN6 311 aa14.23□□□□□ -0.13
PMS1-213ENST00000441310 UCN2Q96RP3 112 aa14.23□□□□□ -0.13
PMS1-213ENST00000441310 IGHV2OR16-5A0A0B4J2B6 119 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 HSPB6O14558 160 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 IGLV3-1P01715 115 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms