RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 OR2A7Q96R45 310 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 SRD5A1P18405 259 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 LIMS1P48059 325 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 TMEM33P57088 247 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 SIGLECL1Q8N7X8 197 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 PRSS3P2Q8NHM4 247 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 ASB13Q8WXK3 278 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 SEMA5BQ9P283 1151 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 ANKRD20A5PA0PJZ0 165 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 H0YL77 283 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 ZNF735P0CB33 412 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 SSTR5P35346 364 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 RANP62826 216 aaKnown RBP10.31□□□□□ -0.76
NEK1-201ENST00000439128 Q71RC1 249 aaPredicted RBP10.31□□□□□ -0.76
NEK1-201ENST00000439128 LYZL2Q7Z4W2 148 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 ZIC4Q8N9L1 334 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 SYT8Q8NBV8 401 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 IGHV3OR16-13A0A075B7E8 117 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 IGHV3-74A0A0B4J1X5 117 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 A0A0G2JLM5 398 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 CAMPP49913 170 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 EFNA4P52798 201 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 EFNB2P52799 333 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 AMMECR1LQ6DCA0 310 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 ACP7Q6ZNF0 438 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 P01737 135 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 C1QBP02746 253 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 TIMP3P35625 211 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 MIDNQ504T8 468 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 FAM122BQ7Z309 247 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 RTN4RL2Q86UN3 420 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 NOL4LQ96MY1 436 aaPredicted RBP10.31□□□□□ -0.76
NEK1-201ENST00000439128 THADAQ6YHU6 1953 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 SLC16A13Q7RTY0 426 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 HOGA1Q86XE5 327 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 MESP1Q9BRJ9 268 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 RTN4RQ9BZR6 473 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 PLAUP00749 431 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 IGHV3-11P01762 117 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 NPBWR2P48146 333 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 RND2P52198 227 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 EMP1P54849 157 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 PPP1R27Q86WC6 154 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 SLC25A33Q9BSK2 321 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 PEMTQ9UBM1 199 aa10.31□□□□□ -0.76
NEK1-201ENST00000439128 TRAV30A0A087WSZ9 112 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 A0A0G2JNJ9 132 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 IGHMP01871 453 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 RCC1P18754 421 aaPredicted RBP10.3□□□□□ -0.76
NEK1-201ENST00000439128 OR10J1P30954 320 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 CA7P43166 264 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 GZMMP51124 257 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 EGR4Q05215 589 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 Q0VFX4 171 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 FAM216AQ8WUB2 273 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 PAXXQ9BUH6 204 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 FAM206AQ9NX38 181 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 Q9UFV3 132 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 AHCTF1Q8WYP5 2266 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 RHBDL1O75783 438 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 INHBBP09529 407 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 PRR30Q53SZ7 412 aaPredicted RBP10.3□□□□□ -0.76
NEK1-201ENST00000439128 QTRT1Q9BXR0 403 aaKnown RBP10.3□□□□□ -0.76
NEK1-201ENST00000439128 TMEM140Q9NV12 185 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 YTHDF2Q9Y5A9 579 aaKnown RBP10.3□□□□□ -0.76
NEK1-201ENST00000439128 IGSF23A1L1A6 192 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 DEDDO75618 318 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 PSG7Q13046 419 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 WFDC6Q9BQY6 131 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 FBXL15Q9H469 300 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 PPP1R2P9O14990 202 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 FAM157CP0CG43 387 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 CD1BP29016 333 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 TMEM30BQ3MIR4 351 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 PDZD11Q5EBL8 140 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 SAXO1Q8IYX7 474 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 RCC2Q9P258 522 aaKnown RBP10.3□□□□□ -0.76
NEK1-201ENST00000439128 S4R3C0 116 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 PCM1Q15154 2024 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 TUBGCP6Q96RT7 1819 aa10.3□□□□□ -0.76
NEK1-201ENST00000439128 ZNF207O43670 478 aaKnown RBP10.29□□□□□ -0.76
NEK1-201ENST00000439128 RNASEKQ6P5S7 137 aaKnown RBP10.29□□□□□ -0.76
NEK1-201ENST00000439128 IGHV3-66A0A0C4DH42 116 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 IL18BPO95998 194 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 P2RY1P47900 373 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 FBXL17Q9UF56 701 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 IGHV3-49A0A0A0MS15 119 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 A0A0B4J293 547 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 TSTD3H0UI37 97 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 TSPOP30536 169 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 PEAR1Q5VY43 1037 aaPredicted RBP10.29□□□□□ -0.76
NEK1-201ENST00000439128 ZNF429Q86V71 674 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 VKORC1L1Q8N0U8 176 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 U3KQ87 197 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 TCF20Q9UGU0 1960 aaKnown RBP10.29□□□□□ -0.76
NEK1-201ENST00000439128 FAM90A10PA6NDY2 464 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 FAM90A18PA6NE21 464 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 FAM90A16PA6NEW6 464 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 FAM90A20PA6NIJ5 464 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 FAM90A8PA6NJQ4 464 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms