RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 TCTEX1D1Q8N7M0 179 aa11.11□□□□□ -0.63
TNFRSF1A-203ENST00000437813 CASTOR1Q8WTX7 329 aa11.11□□□□□ -0.63
TNFRSF1A-203ENST00000437813 PLEKHJ1Q9NW61 149 aa11.11□□□□□ -0.63
TNFRSF1A-203ENST00000437813 KCNK7Q9Y2U2 307 aa11.11□□□□□ -0.63
TNFRSF1A-203ENST00000437813 WASHC3Q9Y3C0 194 aa11.11□□□□□ -0.63
TNFRSF1A-203ENST00000437813 HUWE1Q7Z6Z7 4374 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-203ENST00000437813 IGHV4OR15-8A0A075B7B6 117 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 A0A087WW49 117 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 A0A1W2PN81 502 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 OVOL1O14753 267 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 LGALS1P09382 135 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 CHRNA7P36544 502 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 SLURP1P55000 103 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 RPS25P62851 125 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 PLA2G7Q13093 441 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 PSG5Q15238 335 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 P2RY14Q15391 338 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ECSCRQ19T08 205 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 AKIRIN2Q53H80 203 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ACSM6Q6P461 480 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ZNF562Q6V9R5 426 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ZNF429Q86V71 674 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ZNF383Q8NA42 475 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 TMEM203Q969S6 136 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ISYNA1Q9NPH2 558 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 C12orf4Q9NQ89 552 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 KIAA1456Q9P272 454 aa11.1□□□□□ -0.63
TNFRSF1A-203ENST00000437813 TENM2Q9NT68 2774 aa11.09□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ARSBP15848 533 aa11.09□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ZBTB25P24278 435 aa11.09□□□□□ -0.63
TNFRSF1A-203ENST00000437813 CEACAM6P40199 344 aa11.09□□□□□ -0.63
TNFRSF1A-203ENST00000437813 MED22Q15528 200 aa11.09□□□□□ -0.63
TNFRSF1A-203ENST00000437813 DRAXINQ8NBI3 349 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF1A-203ENST00000437813 EDARADDQ8WWZ3 215 aa11.09□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ARHGAP5-AS1Q96IT6 56 aa11.09□□□□□ -0.63
TNFRSF1A-203ENST00000437813 RHOVQ96L33 236 aa11.09□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ASCL2Q99929 193 aa11.09□□□□□ -0.63
TNFRSF1A-203ENST00000437813 PECRQ9BY49 303 aa11.09□□□□□ -0.63
TNFRSF1A-203ENST00000437813 LINC01619G3V211 115 aa11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 ARPC1BO15143 372 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 SPDEFO95238 335 aa11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 IGLV2-23P01705 113 aa11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 CRYGBP07316 175 aa11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 CPEP16870 476 aa11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 AQP4P55087 323 aa11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 FABP5Q01469 135 aa11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 MLLT11Q13015 90 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 MRGPRG-AS1Q2M3A8 158 aa11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 PPP1R27Q86WC6 154 aa11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 SBSPONQ8IVN8 264 aa11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 UFD1Q92890 307 aa11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 C5orf30Q96GV9 206 aa11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 FAM103A1Q9BTL3 118 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 URM1Q9BTM9 101 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 CHMP1AQ9HD42 196 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 MGAT4AQ9UM21 535 aa11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 AK6Q9Y3D8 172 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 SMAD5-AS1Q9Y6J3 95 aa11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 DNAH7Q8WXX0 4024 aa11.08□□□□□ -0.64
TNFRSF1A-203ENST00000437813 SHISA3A0PJX4 238 aa11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 ANKRD65E5RJM6 399 aa11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 SPNP16150 400 aa11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 CRHBPP24387 322 aa11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 VEGFCP49767 419 aa11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 CLDN12P56749 244 aa11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 ACTBL2Q562R1 376 aa11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 PYHIN1Q6K0P9 492 aa11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 LFNGQ8NES3 379 aa11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 SETD6Q8TBK2 473 aa11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 FAM3DQ96BQ1 224 aa11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 CABLES2Q9BTV7 478 aa11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 SCN3BQ9NY72 215 aa11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 METTL1Q9UBP6 276 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 RNF150Q9ULK6 438 aa11.07□□□□□ -0.64
TNFRSF1A-203ENST00000437813 TMEM272A0A1B0GTI8 110 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 TRDCB7Z8K6 153 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 H7C2Y5 167 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 ARL6IP5O75915 188 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 BRI3O95415 125 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 CA2P00918 260 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 TFAP2AP05549 437 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 GSTP1P09211 210 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 PSMA1P25786 263 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 TMEM267Q0VDI3 215 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 PJVKQ0ZLH3 352 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 TRAM1Q15629 374 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 RAB11BQ15907 218 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 C2orf76Q3KRA6 126 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 MOGAT2Q3SYC2 334 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 UNQ5815/PRO19632Q6UWF5 114 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 PDPNQ86YL7 162 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 ARPC1AQ92747 370 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 VCXQ9H320 206 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 SLA2Q9H6Q3 261 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 PLGRKTQ9HBL7 147 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 RDH8Q9NYR8 311 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 A3GALT2U3KPV4 340 aa11.06□□□□□ -0.64
TNFRSF1A-203ENST00000437813 RAB27BO00194 218 aa11.05□□□□□ -0.64
TNFRSF1A-203ENST00000437813 SAP30O75446 220 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms