RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 RNASEK-C17orf49H0YIS7 233 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 SULT2B1O00204 365 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 CXCR6O00574 342 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 CREBL2O60519 120 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-202ENST00000409915 HIST1H2BKO60814 126 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 NDUFS7O75251 213 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 ADAP1O75689 374 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 TNFSF13O75888 250 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 DIRAS1O95057 198 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 UBL3O95164 117 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 RCBTB2O95199 551 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 ZNF682O95780 498 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 THY1P04216 161 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 IGF1P05019 195 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 HIST1H2BJP06899 126 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 SOD3P08294 240 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 FCGR3AP08637 254 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 ADRA2AP08913 450 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 FAM157CP0CG43 387 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 GTF2F2P13984 249 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 ELK1P19419 428 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 SLC2A5P22732 501 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 ANOS1P23352 680 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 HIST1H2BOP23527 126 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 CXCR1P25024 350 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 CCKARP32238 428 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 HIST1H2BBP33778 126 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 TIMP3P35625 211 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 RPL13AP40429 203 aaKnown RBP3.82□□□□□ -1.8
SF3B1-202ENST00000409915 OR1E2P47887 323 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 POLR2HP52434 150 aaKnown RBP3.82□□□□□ -1.8
SF3B1-202ENST00000409915 HIST1H2BDP58876 126 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 RPS4XP62701 263 aaKnown RBP3.82□□□□□ -1.8
SF3B1-202ENST00000409915 HIST1H2BCP62807 126 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 RHOGP84095 191 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 RPL19P84098 196 aaKnown RBP3.82□□□□□ -1.8
SF3B1-202ENST00000409915 PITPNAQ00169 270 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 MADCAM1Q13477 382 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 KLF5Q13887 457 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-202ENST00000409915 OR1Q1Q15612 314 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 FAM189A2Q15884 450 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 TAF9Q16594 264 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 PRSS8Q16651 343 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 HIST2H2BEQ16778 126 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-202ENST00000409915 DHRS11Q6UWP2 260 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 UNQ6126/PRO20091Q6UXV3 157 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 DNM1P46Q6ZS02 220 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 FCRLAQ7L513 359 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 SLC36A1Q7Z2H8 476 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 ZNF550Q7Z398 422 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 SLC35E3Q7Z769 313 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 LYG2Q86SG7 212 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 LRRTM1Q86UE6 522 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 ZNF440Q8IYI8 595 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 C8orf31Q8N9H6 132 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 OR51S1Q8NGJ8 323 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 OR6T1Q8NGN1 323 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 OR4S2Q8NH73 311 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 ASB10Q8WXI3 467 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 HIST1H2BHQ93079 126 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 ARHGDIGQ99819 225 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 HIST1H2BNQ99877 126 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 HIST1H2BMQ99879 126 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 SULT4A1Q9BR01 284 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 SFXN3Q9BWM7 321 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 SMDT1Q9H4I9 107 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 KCNJ16Q9NPI9 418 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 OR2S2Q9NQN1 319 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 IL36GQ9NZH8 169 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 GSKIPQ9P0R6 139 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 MRM2Q9UI43 246 aaKnown RBP3.82□□□□□ -1.8
SF3B1-202ENST00000409915 VAX2Q9UIW0 290 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 TNFSF18Q9UNG2 199 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 INTS1Q8N201 2190 aaKnown RBP3.81□□□□□ -1.8
SF3B1-202ENST00000409915 TRAV30A0A087WSZ9 112 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 A0A0B4J2E0 115 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 A0A1B0GV72 72 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 A0A1B0GX12 115 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 GGT3PA6NGU5 568 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 FAM183AA6NL82 134 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 GJE1A6NN92 205 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 SRRM4A7MD48 611 aaKnown RBP3.81□□□□□ -1.8
SF3B1-202ENST00000409915 C15orf62A8K5M9 175 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 FAAHO00519 579 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 TIMM23O14925 209 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 CYB5BO43169 146 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 SOX15O60248 233 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 RAMP3O60896 148 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 ZNF432O94892 652 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 LYPD3O95274 346 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 BRI3O95415 125 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 TMEM50AO95807 157 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 CST4P01036 141 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 APOHP02749 345 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-202ENST00000409915 CD14P08571 375 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 PMCHP20382 165 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 ZBTB25P24278 435 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 KDELR2P33947 212 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 OPRM1P35372 400 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms