RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 TFF3Q07654 80 aa15.68■□□□□ 0.1
USP39-202ENST00000409025 ZNF816Q0VGE8 651 aaPredicted RBP15.68■□□□□ 0.1
USP39-202ENST00000409025 TMEM30BQ3MIR4 351 aa15.68■□□□□ 0.1
USP39-202ENST00000409025 TCF23Q7RTU1 214 aa15.68■□□□□ 0.1
USP39-202ENST00000409025 BSCL2Q96G97 398 aaPredicted RBP15.68■□□□□ 0.1
USP39-202ENST00000409025 IDI2-AS1Q9NZ38 188 aa15.68■□□□□ 0.1
USP39-202ENST00000409025 UBAC2Q8NBM4 344 aa15.68■□□□□ 0.1
USP39-202ENST00000409025 RNF141Q8WVD5 230 aa15.68■□□□□ 0.1
USP39-202ENST00000409025 TMEM204Q9BSN7 226 aa15.68■□□□□ 0.1
USP39-202ENST00000409025 LINC00574Q9H8X3 128 aa15.68■□□□□ 0.1
USP39-202ENST00000409025 LINC00312Q9Y6C7 94 aa15.68■□□□□ 0.1
USP39-202ENST00000409025 ATRXP46100 2492 aa15.67■□□□□ 0.1
USP39-202ENST00000409025 LINC00473A8K010 186 aa15.67■□□□□ 0.1
USP39-202ENST00000409025 LOXP28300 417 aaPredicted RBP15.67■□□□□ 0.1
USP39-202ENST00000409025 ZNF134P52741 427 aa15.67■□□□□ 0.1
USP39-202ENST00000409025 MEF2CQ06413 473 aaPredicted RBP15.67■□□□□ 0.1
USP39-202ENST00000409025 CD300LFQ8TDQ1 290 aa15.67■□□□□ 0.1
USP39-202ENST00000409025 ABHD14AQ9BUJ0 271 aa15.67■□□□□ 0.1
USP39-202ENST00000409025 REG4Q9BYZ8 158 aa15.67■□□□□ 0.1
USP39-202ENST00000409025 IFI27L2Q9H2X8 130 aa15.67■□□□□ 0.1
USP39-202ENST00000409025 LAMP3Q9UQV4 416 aa15.67■□□□□ 0.1
USP39-202ENST00000409025 IGSF23A1L1A6 192 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 MFSD2BA6NFX1 497 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 KIAA1324LA8MWY0 1029 aaPredicted RBP15.66■□□□□ 0.1
USP39-202ENST00000409025 I3L521 148 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 TNFRSF13BO14836 293 aaPredicted RBP15.66■□□□□ 0.1
USP39-202ENST00000409025 FGF16O43320 207 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 S1PR2O95136 353 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 IGHV3-7P01780 117 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 DUTP33316 252 aaKnown RBP15.66■□□□□ 0.1
USP39-202ENST00000409025 BRWD1-AS2P59051 145 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 HFEQ30201 348 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 TMEM252Q8N6L7 170 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 RAB40CQ96S21 281 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 COA4Q9NYJ1 87 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 TAS2R3Q9NYW6 316 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 GAB2Q9UQC2 676 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 CHD8Q9HCK8 2581 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 NDUFB3O43676 98 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 KRASP01116 189 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 NFYBP25208 207 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 G6PCP35575 357 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 RPL23AP62750 156 aaKnown RBP15.66■□□□□ 0.1
USP39-202ENST00000409025 LRRC10Q5BKY1 277 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 WFDC1Q9HC57 220 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 SESN1Q9Y6P5 492 aa15.66■□□□□ 0.1
USP39-202ENST00000409025 B8ZZF3 427 aa15.65■□□□□ 0.1
USP39-202ENST00000409025 M0R1X1 148 aa15.65■□□□□ 0.1
USP39-202ENST00000409025 TMEM50AO95807 157 aa15.65■□□□□ 0.1
USP39-202ENST00000409025 ROS1P08922 2347 aa15.65■□□□□ 0.1
USP39-202ENST00000409025 RPL31P62899 125 aaKnown RBP15.65■□□□□ 0.1
USP39-202ENST00000409025 TOR2AQ5JU69 321 aa15.65■□□□□ 0.1
USP39-202ENST00000409025 ARFGEF3Q5TH69 2177 aa15.65■□□□□ 0.1
USP39-202ENST00000409025 LEAP2Q969E1 77 aa15.65■□□□□ 0.1
USP39-202ENST00000409025 GAL3ST2Q9H3Q3 398 aa15.65■□□□□ 0.1
USP39-202ENST00000409025 BARX1Q9HBU1 254 aaPredicted RBP15.65■□□□□ 0.1
USP39-202ENST00000409025 TOR1AO14656 332 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 SLC31A2O15432 143 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 NDUFA2O43678 99 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 SYNGR2O43760 224 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 PROP1O75360 226 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 PAX9P55771 341 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 BAXQ07812 192 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 C4orf17Q53FE4 359 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 RPL39P5Q59GN2 51 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 CT45A1Q5HYN5 189 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 NCR3LG1Q68D85 454 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 LYPD2Q6UXB3 125 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 CT45A3Q8NHU0 189 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 MARVELD3Q96A59 401 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 ARV1Q9H2C2 271 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 C19orf12Q9NSK7 152 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 KAAG1Q9UBP8 84 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 LPAR3Q9UBY5 353 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 HCFC1P51610 2035 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 FAM90A26D6RGX4 464 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 P0C879 139 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 FAM157CP0CG43 387 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 PPOXP50336 477 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 LINC00205P59089 165 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 HSD17B13Q7Z5P4 300 aaPredicted RBP15.64■□□□□ 0.09
USP39-202ENST00000409025 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.64■□□□□ 0.09
USP39-202ENST00000409025 OR10A7Q8NGE5 316 aa15.64■□□□□ 0.09
USP39-202ENST00000409025 RPUSD1Q9UJJ7 312 aaKnown RBP15.64■□□□□ 0.09
USP39-202ENST00000409025 TEX46H3BTG2 121 aa15.63■□□□□ 0.09
USP39-202ENST00000409025 RAB29O14966 203 aa15.63■□□□□ 0.09
USP39-202ENST00000409025 FBXO24O75426 580 aa15.63■□□□□ 0.09
USP39-202ENST00000409025 ZNF273Q14593 569 aa15.63■□□□□ 0.09
USP39-202ENST00000409025 UTF1Q5T230 341 aa15.63■□□□□ 0.09
USP39-202ENST00000409025 PRAMEF5Q5TYX0 476 aa15.63■□□□□ 0.09
USP39-202ENST00000409025 H2BFWTQ7Z2G1 175 aa15.63■□□□□ 0.09
USP39-202ENST00000409025 PRELID3BQ9Y3B1 194 aa15.63■□□□□ 0.09
USP39-202ENST00000409025 WSB1Q9Y6I7 421 aa15.63■□□□□ 0.09
USP39-202ENST00000409025 COL6A6A6NMZ7 2263 aa15.63■□□□□ 0.09
USP39-202ENST00000409025 A0A1W2PPE3 182 aa15.62■□□□□ 0.09
USP39-202ENST00000409025 FCGR3BO75015 233 aa15.62■□□□□ 0.09
USP39-202ENST00000409025 ZNF439Q8NDP4 499 aa15.62■□□□□ 0.09
USP39-202ENST00000409025 H1FXQ92522 213 aaKnown RBP15.62■□□□□ 0.09
USP39-202ENST00000409025 ZNF714Q96N38 554 aa15.62■□□□□ 0.09
USP39-202ENST00000409025 GINS3Q9BRX5 216 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms