RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 UBE2ZQ9H832 354 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 MYOZ1Q9NP98 299 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 UBQLN4Q9NRR5 601 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 ANAPC11Q9NYG5 84 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF337Q9Y3M9 751 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 MMACHCQ9Y4U1 282 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 IER3IP1Q9Y5U9 82 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 KPTNQ9Y664 436 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 PIKFYVEQ9Y2I7 2098 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 ALPK3Q96L96 1907 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 IGKV1D-42A0A075B6H8 117 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 IGLV1-50A0A075B6I6 118 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 IGHV3OR16-9A0A0B4J2B5 98 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 WI2-2373I1.2A0A1W2PRP0 233 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF879B4DU55 563 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 J3QLW9 94 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 CD5LO43866 347 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 SC5DO75845 299 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 IGKV3-11P04433 115 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 MRPL3P09001 348 aaKnown RBP3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR8U9P0C7N5 309 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 IL7P13232 177 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 HIST1H1CP16403 213 aaKnown RBP3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 CFL1P23528 166 aaKnown RBP3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 EIF2B2P49770 351 aaKnown RBP3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 HCCSP53701 268 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 CAV3P56539 151 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR12D2P58182 307 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 TAS2R43P59537 309 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 PPP3R1P63098 170 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 SKP2Q13309 424 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 INSL4Q14641 139 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 TRAM1Q15629 374 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 TSC22D1Q15714 1073 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 NNATQ16517 81 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 PYDC2Q56P42 97 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 FBXW12Q6X9E4 464 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 SYS1Q8N2H4 156 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 SLC25A45Q8N413 288 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 LINC00469Q8N7U9 141 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 UBAC2Q8NBM4 344 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR11H7Q8NGC8 314 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR2T27Q8NH04 317 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR8U1Q8NH10 309 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR4K13Q8NH42 304 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF721Q8TF20 911 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 RNF138Q8WVD3 245 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 ACOT12Q8WYK0 555 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 RGP1Q92546 391 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 GHSRQ92847 366 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 TCEAL3Q969E4 200 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 CLDN23Q96B33 292 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 DIRAS2Q96HU8 199 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 GPX7Q96SL4 187 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 TBX5Q99593 518 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 NUDT9Q9BW91 350 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR8D2Q9GZM6 311 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 PRO3102Q9H379 93 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 SAV1Q9H4B6 383 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 RPP21Q9H633 154 aaKnown RBP3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 NOX3Q9HBY0 568 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 COMMD3Q9UBI1 195 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 CELA1Q9UNI1 258 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 C2orf16Q68DN1 1984 aa3.18□□□□□ -1.9
HMGB3P18-201ENST00000406327 KIAA0100Q14667 2235 aaKnown RBP3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 LAMA2P24043 3122 aaKnown RBP3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 ANKRD12Q6UB98 2062 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 TRAV1-2A0A0B4J238 106 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 LINC00854A0A1B0GVQ3 168 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 A0A1B0GX78 115 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 LRRN3E7EW58 273 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 H7C417 338 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 TOX3O15405 576 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 PLA2G10O15496 165 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 HPGDSO60760 199 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 GATBO75879 557 aaKnown RBP3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 HLA-DQB1P01920 261 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 GYPBP06028 91 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 CD14P08571 375 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 ASAH2BP0C7U1 165 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 GIMD1P0DJR0 217 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 SPI1P17947 270 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 HTR1DP28221 377 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 PYCR1P32322 319 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 CXCL12P48061 93 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR2B6P58173 313 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 RPS23P62266 143 aaKnown RBP3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 CCDC58Q4VC31 144 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 ACSM3Q53FZ2 586 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 AVPI1Q5T686 147 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 IDNKQ5T6J7 187 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 HBMQ6B0K9 141 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 RPL22L1Q6P5R6 122 aaKnown RBP3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 LINC00336Q6ZUF6 198 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 SSX6Q7RTT6 188 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 AKAP14Q86UN6 197 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 RAB43Q86YS6 212 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 PLPP5Q8NEB5 264 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR5J2Q8NH18 312 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 TSLPQ969D9 159 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms