RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 ARPC4P59998 168 aa16.52■□□□□ 0.24
PDGFA-204ENST00000405692 ACTBP60709 375 aa16.52■□□□□ 0.24
PDGFA-204ENST00000405692 BEST4Q8NFU0 473 aa16.52■□□□□ 0.24
PDGFA-204ENST00000405692 BCL7BQ9BQE9 202 aa16.52■□□□□ 0.24
PDGFA-204ENST00000405692 OR2D2Q9H210 308 aa16.52■□□□□ 0.24
PDGFA-204ENST00000405692 PLSCR3Q9NRY6 295 aa16.52■□□□□ 0.24
PDGFA-204ENST00000405692 KIAA1456Q9P272 454 aa16.52■□□□□ 0.24
PDGFA-204ENST00000405692 WASHC3Q9Y3C0 194 aa16.52■□□□□ 0.24
PDGFA-204ENST00000405692 H7C2Y5 167 aa16.51■□□□□ 0.23
PDGFA-204ENST00000405692 APOA2P02652 100 aa16.51■□□□□ 0.23
PDGFA-204ENST00000405692 ZNF182P17025 639 aaPredicted RBP16.51■□□□□ 0.23
PDGFA-204ENST00000405692 SOX6P35712 828 aa16.51■□□□□ 0.23
PDGFA-204ENST00000405692 FAM131AQ6UXB0 335 aa16.51■□□□□ 0.23
PDGFA-204ENST00000405692 HOGA1Q86XE5 327 aa16.51■□□□□ 0.23
PDGFA-204ENST00000405692 CLVS1Q8IUQ0 354 aaPredicted RBP16.51■□□□□ 0.23
PDGFA-204ENST00000405692 C11orf44Q8N8P7 122 aa16.51■□□□□ 0.23
PDGFA-204ENST00000405692 OR5AU1Q8NGC0 362 aa16.51■□□□□ 0.23
PDGFA-204ENST00000405692 OR5AN1Q8NGI8 311 aa16.51■□□□□ 0.23
PDGFA-204ENST00000405692 WIPF2Q8TF74 440 aaPredicted RBP16.51■□□□□ 0.23
PDGFA-204ENST00000405692 RAB2BQ8WUD1 216 aa16.51■□□□□ 0.23
PDGFA-204ENST00000405692 CHPT1Q8WUD6 406 aa16.51■□□□□ 0.23
PDGFA-204ENST00000405692 RNF5Q99942 180 aa16.51■□□□□ 0.23
PDGFA-204ENST00000405692 H0YJW9 148 aa16.5■□□□□ 0.23
PDGFA-204ENST00000405692 NOL3O60936 208 aaKnown RBP16.5■□□□□ 0.23
PDGFA-204ENST00000405692 SLC22A5O76082 557 aa16.5■□□□□ 0.23
PDGFA-204ENST00000405692 TMBIM6P55061 237 aa16.5■□□□□ 0.23
PDGFA-204ENST00000405692 F2RL1P55085 397 aa16.5■□□□□ 0.23
PDGFA-204ENST00000405692 TAS2R20P59543 309 aa16.5■□□□□ 0.23
PDGFA-204ENST00000405692 TAGLNQ01995 201 aaKnown RBP16.5■□□□□ 0.23
PDGFA-204ENST00000405692 FAM71E2Q8N5Q1 922 aa16.5■□□□□ 0.23
PDGFA-204ENST00000405692 OR4X2Q8NGF9 303 aa16.5■□□□□ 0.23
PDGFA-204ENST00000405692 GON7Q9BXV9 100 aa16.5■□□□□ 0.23
PDGFA-204ENST00000405692 IFT46Q9NQC8 304 aa16.5■□□□□ 0.23
PDGFA-204ENST00000405692 SCOCQ9UIL1 159 aa16.5■□□□□ 0.23
PDGFA-204ENST00000405692 OR2W1Q9Y3N9 320 aa16.5■□□□□ 0.23
PDGFA-204ENST00000405692 M0R1X1 148 aa16.49■□□□□ 0.23
PDGFA-204ENST00000405692 AP4M1O00189 453 aa16.49■□□□□ 0.23
PDGFA-204ENST00000405692 NBR2O15453 112 aa16.49■□□□□ 0.23
PDGFA-204ENST00000405692 CSF1P09603 554 aa16.49■□□□□ 0.23
PDGFA-204ENST00000405692 LUMP51884 338 aaPredicted RBP16.49■□□□□ 0.23
PDGFA-204ENST00000405692 SLC35B1P78383 322 aa16.49■□□□□ 0.23
PDGFA-204ENST00000405692 CBX3Q13185 183 aa16.49■□□□□ 0.23
PDGFA-204ENST00000405692 TREML4Q6UXN2 200 aa16.49■□□□□ 0.23
PDGFA-204ENST00000405692 GLDNQ6ZMI3 551 aaPredicted RBP16.49■□□□□ 0.23
PDGFA-204ENST00000405692 NPBQ8NG41 125 aa16.49■□□□□ 0.23
PDGFA-204ENST00000405692 NECAP2Q9NVZ3 263 aa16.49■□□□□ 0.23
PDGFA-204ENST00000405692 SDHAF2Q9NX18 166 aa16.49■□□□□ 0.23
PDGFA-204ENST00000405692 PSMB11A5LHX3 300 aa16.48■□□□□ 0.23
PDGFA-204ENST00000405692 PROP1O75360 226 aa16.48■□□□□ 0.23
PDGFA-204ENST00000405692 OPN1MWP04001 364 aa16.48■□□□□ 0.23
PDGFA-204ENST00000405692 EIF4EP06730 217 aaKnown RBP16.48■□□□□ 0.23
PDGFA-204ENST00000405692 OPN1MW2P0DN77 364 aa16.48■□□□□ 0.23
PDGFA-204ENST00000405692 OPN1MW3P0DN78 364 aa16.48■□□□□ 0.23
PDGFA-204ENST00000405692 CD28P10747 220 aa16.48■□□□□ 0.23
PDGFA-204ENST00000405692 PRSS3P35030 304 aa16.48■□□□□ 0.23
PDGFA-204ENST00000405692 NDUFA11Q86Y39 141 aa16.48■□□□□ 0.23
PDGFA-204ENST00000405692 PDPNQ86YL7 162 aa16.48■□□□□ 0.23
PDGFA-204ENST00000405692 ADTRPQ96IZ2 230 aa16.48■□□□□ 0.23
PDGFA-204ENST00000405692 MMP27Q9H306 513 aa16.48■□□□□ 0.23
PDGFA-204ENST00000405692 NFYAP23511 347 aaPredicted RBP16.47■□□□□ 0.23
PDGFA-204ENST00000405692 THBS3P49746 956 aa16.47■□□□□ 0.23
PDGFA-204ENST00000405692 GVQW1Q8N7I0 195 aa16.47■□□□□ 0.23
PDGFA-204ENST00000405692 DRAXINQ8NBI3 349 aaPredicted RBP16.47■□□□□ 0.23
PDGFA-204ENST00000405692 TSNAXQ99598 290 aaKnown RBP16.47■□□□□ 0.23
PDGFA-204ENST00000405692 ZNF107Q9UII5 783 aaPredicted RBP16.47■□□□□ 0.23
PDGFA-204ENST00000405692 FAM25AB3EWG3 89 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 FAM25CB3EWG5 89 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 FAM25GB3EWG6 89 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 HPGDSO60760 199 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 NDUFA3O95167 84 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 HLA-DQB1P01920 261 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 RRASP10301 218 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 PLGLAQ15195 96 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 C5orf64Q2M2E5 130 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 LIN54Q6MZP7 749 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 STPG2Q8N412 459 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 COMMD1Q8N668 190 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 ZNF645Q8N7E2 425 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 ZNF383Q8NA42 475 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 OR5AP2Q8NGF4 316 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 FLYWCH2Q96CP2 140 aaKnown RBP16.46■□□□□ 0.23
PDGFA-204ENST00000405692 CITED2Q99967 270 aaPredicted RBP16.46■□□□□ 0.23
PDGFA-204ENST00000405692 SLC35D1Q9NTN3 355 aa16.46■□□□□ 0.23
PDGFA-204ENST00000405692 MRPS7Q9Y2R9 242 aaKnown RBP16.46■□□□□ 0.23
PDGFA-204ENST00000405692 RRHO14718 337 aa16.45■□□□□ 0.22
PDGFA-204ENST00000405692 HLA-DRB1P01911 266 aa16.45■□□□□ 0.22
PDGFA-204ENST00000405692 PTHLHP12272 177 aa16.45■□□□□ 0.22
PDGFA-204ENST00000405692 ELK1P19419 428 aa16.45■□□□□ 0.22
PDGFA-204ENST00000405692 RPS16P62249 146 aaKnown RBP16.45■□□□□ 0.22
PDGFA-204ENST00000405692 CD83Q01151 205 aa16.45■□□□□ 0.22
PDGFA-204ENST00000405692 RTL8BQ17RB0 113 aa16.45■□□□□ 0.22
PDGFA-204ENST00000405692 RITA1Q96K30 269 aa16.45■□□□□ 0.22
PDGFA-204ENST00000405692 SCPEP1Q9HB40 452 aa16.45■□□□□ 0.22
PDGFA-204ENST00000405692 TET2Q6N021 2002 aaPredicted RBP16.45■□□□□ 0.22
PDGFA-204ENST00000405692 TCRBV4S1A1TA0A5B7 111 aa16.44■□□□□ 0.22
PDGFA-204ENST00000405692 SPDEFO95238 335 aa16.44■□□□□ 0.22
PDGFA-204ENST00000405692 OR5H8P0DN80 308 aa16.44■□□□□ 0.22
PDGFA-204ENST00000405692 CNTFRP26992 372 aa16.44■□□□□ 0.22
PDGFA-204ENST00000405692 NSUN5P1Q3KNT7 163 aa16.44■□□□□ 0.22
PDGFA-204ENST00000405692 C15orf40Q8WUR7 153 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms