RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 TAS2R5Q9NYW4 299 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 ZNF230Q9UIE0 474 aaPredicted RBP5.36□□□□□ -1.55
SMCO1-201ENST00000397537 RALGAPA1Q6GYQ0 2036 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 TRAV8-4A0A0B4J246 113 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 TRAPPC13A5PLN9 417 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 OR4C46A6NHA9 309 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 J3QT63 122 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 OR7C1O76099 320 aaPredicted RBP5.35□□□□□ -1.55
SMCO1-201ENST00000397537 NXPH4O95158 308 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 P01737 135 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 SLC35G6P0C7Q6 338 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 ZNF708P17019 499 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 IL1RNP18510 177 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 CRHBPP24387 322 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 ZNF133P52736 654 aaPredicted RBP5.35□□□□□ -1.55
SMCO1-201ENST00000397537 NCS1P62166 190 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 RUNX1Q01196 453 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 HENMT1Q5T8I9 393 aaKnown RBP5.35□□□□□ -1.55
SMCO1-201ENST00000397537 UFSP1Q6NVU6 142 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 PIP4P1Q86T03 277 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 C6orf223Q8N319 242 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 OR13C4Q8NGS5 318 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 OR13C8Q8NGS7 320 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 BLNKQ8WV28 456 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 SKA2Q8WVK7 121 aaPredicted RBP5.35□□□□□ -1.55
SMCO1-201ENST00000397537 C20orf85Q9H1P6 137 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 POLR1DQ9Y2S0 133 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 ATG2AQ2TAZ0 1938 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 MYH10P35580 1976 aa5.35□□□□□ -1.55
SMCO1-201ENST00000397537 TRAV30A0A087WSZ9 112 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 A0A0G2JND7 137 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 LINC01548A6NM66 108 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 LINC01565O15544 149 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 OR2T1O43869 369 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 KLK7P49862 253 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 NDUFA8P51970 172 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 DEFB103AP81534 67 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 PRDX1Q06830 199 aaKnown RBP5.34□□□□□ -1.55
SMCO1-201ENST00000397537 SRSF4Q08170 494 aaKnown RBP5.34□□□□□ -1.55
SMCO1-201ENST00000397537 UBE2SQ16763 222 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 TMEM241Q24JQ0 296 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 TMEM128Q5BJH2 165 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 MESTQ5EB52 335 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 MUC21Q5SSG8 566 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 C10orf25Q5T742 122 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 AWAT2Q6E213 333 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 NPWQ8N729 165 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 PHF3Q92576 2039 aaKnown RBP5.34□□□□□ -1.55
SMCO1-201ENST00000397537 TMEM159Q96B96 161 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 SEH1LQ96EE3 360 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 OR7D2Q96RA2 312 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 GINS3Q9BRX5 216 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 RTBDNQ9BSG5 229 aaPredicted RBP5.34□□□□□ -1.55
SMCO1-201ENST00000397537 TUBA4BQ9H853 241 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 DOK5Q9P104 306 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 V9GY05 133 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 MYO10Q9HD67 2058 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 LOC400499M0QZD8 3231 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 PIEZO2Q9H5I5 2752 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 DMXL2Q8TDJ6 3036 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 IGHV3OR16-12A0A075B7B8 117 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 IQCMA0A1B0GVH7 501 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 RPL36A-HNRNPH2H7BZ11 118 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 MANBAO00462 879 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 STK16O75716 305 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 MPGP29372 298 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 CACNG7P62955 275 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 ACOT6Q3I5F7 207 aaPredicted RBP5.34□□□□□ -1.55
SMCO1-201ENST00000397537 C10orf91Q5T1B1 145 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 IGFL2Q6UWQ7 119 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 FBXW12Q6X9E4 464 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 ZNF571Q7Z3V5 609 aaPredicted RBP5.34□□□□□ -1.55
SMCO1-201ENST00000397537 OAFQ86UD1 273 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 H1FOOQ8IZA3 346 aaPredicted RBP5.34□□□□□ -1.55
SMCO1-201ENST00000397537 ZNF567Q8N184 647 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 LYG1Q8N1E2 194 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 OR5AP2Q8NGF4 316 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 NEIL3Q8TAT5 605 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 C18orf12Q96KH6 178 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 LXNQ9BS40 222 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 EMC6Q9BV81 110 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 KRTAP17-1Q9BYP8 105 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 OR51E2Q9H255 320 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 CST9LQ9H4G1 147 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 DNAJC27Q9NZQ0 273 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 VSIG4Q9Y279 399 aa5.34□□□□□ -1.55
SMCO1-201ENST00000397537 CKAP5Q14008 2032 aa5.34□□□□□ -1.56
SMCO1-201ENST00000397537 TEX15Q9BXT5 2789 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 RBFOX3A6NFN3 312 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 COLCA2A8K830 154 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 TDGF1P13385 188 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 CXCL3P19876 107 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 ZBTB25P24278 435 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 BRS3P32247 399 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 BTCP35070 178 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 CTRLP40313 264 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 OR1E2P47887 323 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 TCTAP57738 103 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 JOSD1Q15040 202 aaPredicted RBP5.33□□□□□ -1.56
SMCO1-201ENST00000397537 XAF1Q6GPH4 301 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms