RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 LY6G6FQ5SQ64 297 aa12.98□□□□□ -0.33
CHL1-202ENST00000397491 MARS2Q96GW9 593 aaKnown RBP12.98□□□□□ -0.33
CHL1-202ENST00000397491 EP300Q09472 2414 aaPredicted RBP12.98□□□□□ -0.33
CHL1-202ENST00000397491 FGF16O43320 207 aa12.98□□□□□ -0.33
CHL1-202ENST00000397491 ZXDCQ2QGD7 858 aaPredicted RBP12.98□□□□□ -0.33
CHL1-202ENST00000397491 SAMD13Q5VXD3 122 aa12.98□□□□□ -0.33
CHL1-202ENST00000397491 HYAL1Q12794 435 aa12.98□□□□□ -0.33
CHL1-202ENST00000397491 UNC119Q13432 240 aa12.98□□□□□ -0.33
CHL1-202ENST00000397491 HIST1H2BLQ99880 126 aa12.98□□□□□ -0.33
CHL1-202ENST00000397491 TINAGQ9UJW2 476 aa12.98□□□□□ -0.33
CHL1-202ENST00000397491 DLEC1Q9Y238 1755 aa12.98□□□□□ -0.33
CHL1-202ENST00000397491 LY75O60449 1722 aa12.98□□□□□ -0.33
CHL1-202ENST00000397491 LYZL6O75951 148 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 CCL7P80098 99 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 FAM222BQ8WU58 562 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 SDF2L1Q9HCN8 221 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 G6PC2Q9NQR9 355 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 A0A1B0GTI1 187 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 NUTF2P61970 127 aaKnown RBP12.97□□□□□ -0.33
CHL1-202ENST00000397491 PMCHL2Q9BQD1 86 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 FAM206AQ9NX38 181 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 SCN3AQ9NY46 2000 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 TFPI2P48307 235 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 ARF6P62330 175 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 SFTPA1Q8IWL2 248 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 OR1N2Q8NGR9 330 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 SPSB4Q96A44 273 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 RASL10BQ96S79 203 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 PSMG3Q9BT73 122 aaPredicted RBP12.97□□□□□ -0.33
CHL1-202ENST00000397491 ASCL3Q9NQ33 180 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 OR51B2Q9Y5P1 312 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 DICER1Q9UPY3 1922 aaKnown RBP12.97□□□□□ -0.33
CHL1-202ENST00000397491 ZP4Q12836 540 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 GFI1BQ5VTD9 330 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 HEPN1Q6WQI6 88 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 C9orf40Q8IXQ3 194 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 ZNF385AQ96PM9 386 aaKnown RBP12.97□□□□□ -0.33
CHL1-202ENST00000397491 RNF126Q9BV68 326 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 PLA2G3Q9NZ20 509 aa12.97□□□□□ -0.33
CHL1-202ENST00000397491 S1PR2O95136 353 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 HOXC4P09017 264 aaPredicted RBP12.96□□□□□ -0.33
CHL1-202ENST00000397491 KIR2DL1P43626 348 aaPredicted RBP12.96□□□□□ -0.33
CHL1-202ENST00000397491 KIR2DL2P43627 348 aaPredicted RBP12.96□□□□□ -0.33
CHL1-202ENST00000397491 CLDND2Q8NHS1 167 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 TM4SF19Q96DZ7 209 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 RASL11BQ9BPW5 248 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 IGHV1OR21-1A0A087WYE8 117 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 SNAI2O43623 268 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 NUBP1P53384 320 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 TWIST1Q15672 202 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 PTPRFP10586 1907 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 TRGV5A0A0B4J1U4 118 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 SMIM13P0DJ93 91 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 SRFP11831 508 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 ZNF83P51522 516 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 ZNF818PQ6ZRF7 136 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 NEU1Q99519 415 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 SSBP3Q9BWW4 388 aaPredicted RBP12.96□□□□□ -0.33
CHL1-202ENST00000397491 FOCADQ5VW36 1801 aa12.96□□□□□ -0.33
CHL1-202ENST00000397491 ZNF318Q5VUA4 2279 aa12.96□□□□□ -0.34
CHL1-202ENST00000397491 A1L4Q6 167 aa12.96□□□□□ -0.34
CHL1-202ENST00000397491 MS4A18H0YCH9 400 aa12.96□□□□□ -0.34
CHL1-202ENST00000397491 MS4A18Q3C1V0 323 aa12.96□□□□□ -0.34
CHL1-202ENST00000397491 LILRA6Q6PI73 481 aa12.96□□□□□ -0.34
CHL1-202ENST00000397491 SPRED2Q7Z698 418 aa12.96□□□□□ -0.34
CHL1-202ENST00000397491 HARBI1Q96MB7 349 aa12.96□□□□□ -0.34
CHL1-202ENST00000397491 RIF1Q5UIP0 2472 aaKnown RBP12.96□□□□□ -0.34
CHL1-202ENST00000397491 CKS2P33552 79 aa12.96□□□□□ -0.34
CHL1-202ENST00000397491 FGF12P61328 243 aa12.96□□□□□ -0.34
CHL1-202ENST00000397491 HIST3H2BBQ8N257 126 aa12.96□□□□□ -0.34
CHL1-202ENST00000397491 OR10AG1Q8NH19 301 aa12.96□□□□□ -0.34
CHL1-202ENST00000397491 DERL1Q9BUN8 251 aa12.96□□□□□ -0.34
CHL1-202ENST00000397491 GPR35Q9HC97 309 aa12.96□□□□□ -0.34
CHL1-202ENST00000397491 GDF9O60383 454 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 ZG16O60844 167 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 GPX4P36969 197 aaPredicted RBP12.95□□□□□ -0.34
CHL1-202ENST00000397491 KLF3P57682 345 aaPredicted RBP12.95□□□□□ -0.34
CHL1-202ENST00000397491 FBLN7Q53RD9 439 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 LDLRAD2Q5SZI1 272 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 LOXL2Q9Y4K0 774 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 SLC17A3O00476 420 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 KLF4O43474 513 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 KCNK17Q96T54 332 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 FAM90A26D6RGX4 464 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 F8VVB4 439 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 F8VWA3 439 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 THY1P04216 161 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 LINC00869P0C866 280 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 TMEM170AQ8WVE7 144 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 THYN1Q9P016 225 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 APELAP0DMC3 54 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 TMEM177Q53S58 311 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 CALHM1Q8IU99 346 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 R4GN57 208 aa12.95□□□□□ -0.34
CHL1-202ENST00000397491 USP54Q70EL1 1684 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 GNG7O60262 68 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 PLAUP00749 431 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 KCNS1Q96KK3 526 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 Q96M66 194 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 SERF1AO75920 110 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms