RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 IGHV2-70DA0A0C4DH43 119 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 K7EP13 123 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 OR5AL1P0C617 328 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 NMUP48645 174 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 ZNF133P52736 654 aaPredicted RBP7.29□□□□□ -1.24
NDE1-202ENST00000396355 MEF2BQ02080 365 aaPredicted RBP7.29□□□□□ -1.24
NDE1-202ENST00000396355 TTC32Q5I0X7 151 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 Q6ZWC4 215 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 PRSS41Q7RTY9 318 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 C6orf201Q7Z4U5 140 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 LINC01551Q86U37 167 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 OR10AG1Q8NH19 301 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 FLVCR1-AS1Q8TAF5 88 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 C4orf45Q96LM5 186 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 C20orf144Q9BQM9 153 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 WFDC1Q9HC57 220 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 JKAMPQ9P055 326 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 DOCK10Q96BY6 2186 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 TRBV24-1A0A075B6N3 115 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 NUPR1O60356 82 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 TNFRSF4P43489 277 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 ACSM6Q6P461 480 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 MRGPRGQ86SM5 289 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 C1orf174Q8IYL3 243 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 POC1AQ8NBT0 407 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 OR1K1Q8NGR3 316 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 SMDT1Q9H4I9 107 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 PLSCR4Q9NRQ2 329 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 CRIM1Q9NZV1 1036 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 MCTS1Q9ULC4 181 aaKnown RBP7.28□□□□□ -1.24
NDE1-202ENST00000396355 TICRRQ7Z2Z1 1910 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 A0A1B0GWB2 263 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 PRSS12P56730 875 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 FOXK1P85037 733 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 SHISA6Q6ZSJ9 500 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 LRRC75AQ8NAA5 344 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 TMEM52Q8NDY8 209 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 BAHD1Q8TBE0 780 aaPredicted RBP7.28□□□□□ -1.24
NDE1-202ENST00000396355 TMEM45BQ96B21 275 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 SARAFQ96BY9 339 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 DGAT2Q96PD7 388 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 HDHD3Q9BSH5 251 aaPredicted RBP7.28□□□□□ -1.24
NDE1-202ENST00000396355 TMEM191AQ9H0A3 160 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 ZNF703Q9H7S9 590 aaPredicted RBP7.28□□□□□ -1.24
NDE1-202ENST00000396355 GPR84Q9NQS5 396 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 HIF1ANQ9NWT6 349 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 PLEK2Q9NYT0 353 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 GPR132Q9UNW8 380 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 SHANK1Q9Y566 2161 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 LYPD3O95274 346 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 GABRG2P18507 467 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 ARR3P36575 388 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 EDDM3BP56851 147 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 RPS11P62280 158 aaKnown RBP eCLIP7.28□□□□□ -1.24
NDE1-202ENST00000396355 TMEM252Q8N6L7 170 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 OR4S2Q8NH73 311 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 DAZLQ92904 295 aaKnown RBP7.28□□□□□ -1.24
NDE1-202ENST00000396355 GFI1Q99684 422 aa7.28□□□□□ -1.24
NDE1-202ENST00000396355 COA3Q9Y2R0 106 aaPredicted RBP7.28□□□□□ -1.24
NDE1-202ENST00000396355 UTS2O95399 124 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 TNFP01375 233 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 HSD52Q0P140 79 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 RUNX2Q13950 521 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 IZUMO4Q1ZYL8 232 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 C1QL3Q5VWW1 255 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 SHISA2Q6UWI4 295 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 ZAR1Q86SH2 424 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 SLC38A9Q8NBW4 561 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 UBALD1Q8TB05 177 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 PSENENQ9NZ42 101 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 LRP4O75096 1905 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 K7EQS6 105 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 CDX4O14627 284 aaPredicted RBP7.27□□□□□ -1.25
NDE1-202ENST00000396355 PPBPP02775 128 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 IGLC2P0DOY2 106 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 IGLC3P0DOY3 106 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 FXYD3Q14802 87 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 PMCHL1Q16048 86 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 SFTPA2Q8IWL1 248 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 TMEM56Q96MV1 263 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 SDF2Q99470 211 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 OBP2BQ9NPH6 170 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 TMEM56-RWDD3S4R434 201 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 KIF26BQ2KJY2 2108 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 TMSB15BA0A087X1C1 80 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 FAM231BA6NCW3 169 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 OR4C46A6NHA9 309 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 SLC25A6P12236 298 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 MEF2CQ06413 473 aaPredicted RBP7.27□□□□□ -1.25
NDE1-202ENST00000396355 Q6ZSR6 202 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 LHFPL4Q7Z7J7 247 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 C3orf56Q8N813 242 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 OR2M3Q8NG83 312 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 OR8B12Q8NGG6 310 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 OR13G1Q8NGZ3 307 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 WDYHV1Q96HA8 205 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 COL4A2P08572 1712 aa7.27□□□□□ -1.25
NDE1-202ENST00000396355 DOPEY2Q9Y3R5 2298 aa7.26□□□□□ -1.25
NDE1-202ENST00000396355 AHRRA9YTQ3 701 aa7.26□□□□□ -1.25
NDE1-202ENST00000396355 PTGER4P35408 488 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms