RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TIMM23BQ5SRD1 257 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 FAM57BQ71RH2 274 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 SSX7Q7RTT5 188 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.53□□□□□ -1.68
VPS41-203ENST00000395969 CENPVQ7Z7K6 275 aaPredicted RBP4.53□□□□□ -1.68
VPS41-203ENST00000395969 TGIF2LYQ8IUE0 185 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 ABHD14AQ9BUJ0 271 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 TMEM59Q9BXS4 323 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 FGF23Q9GZV9 251 aaPredicted RBP4.53□□□□□ -1.68
VPS41-203ENST00000395969 MBNL3Q9NUK0 354 aaKnown RBP4.53□□□□□ -1.68
VPS41-203ENST00000395969 RAI1Q7Z5J4 1906 aaPredicted RBP4.53□□□□□ -1.68
VPS41-203ENST00000395969 DIDO1Q9BTC0 2240 aaKnown RBP4.53□□□□□ -1.68
VPS41-203ENST00000395969 WDR87Q6ZQQ6 2873 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 LOC102723971A0A1B0GUV8 181 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 XKRY2A2RUG3 117 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 TMEM8BA6NDV4 472 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.53□□□□□ -1.68
VPS41-203ENST00000395969 NRASP01111 189 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 PFN1P07737 140 aaKnown RBP4.53□□□□□ -1.68
VPS41-203ENST00000395969 CTXN2P0C2S0 81 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 TGFBR3Q03167 851 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 GLIPR1L1Q6UWM5 242 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 PET117Q6UWS5 81 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 MRGPRGQ86SM5 289 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 MKXQ8IYA7 352 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 CMTM1Q8IZ96 169 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 FBXL14Q8N1E6 418 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 OR2G3Q8NGZ4 309 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 TMEM170AQ8WVE7 144 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 TMEM18Q96B42 140 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 CYYR1Q96J86 154 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 GAL3ST2Q9H3Q3 398 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 SDF2L1Q9HCN8 221 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 C14orf166Q9Y224 244 aaKnown RBP4.53□□□□□ -1.68
VPS41-203ENST00000395969 SLC25A15Q9Y619 301 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 RFNGQ9Y644 331 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 TRAV1-1A0A0B4J248 108 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 ZNF503-AS2A6NEH8 195 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 ZNF732B4DXR9 585 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 SDCBPO00560 298 aaPredicted RBP4.53□□□□□ -1.68
VPS41-203ENST00000395969 NXPH2O95156 264 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 KNG1P01042 644 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 AMY2BP19961 511 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 ATP6V0CP27449 155 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 OR3A4PP47883 348 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 EIF4EBP1Q13541 118 aaPredicted RBP4.53□□□□□ -1.68
VPS41-203ENST00000395969 ZNF266Q14584 549 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 TMEM187Q14656 261 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 PDLIM3Q53GG5 364 aaPredicted RBP4.53□□□□□ -1.68
VPS41-203ENST00000395969 DPPA3Q6W0C5 159 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 STARD4Q96DR4 205 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 C18orf12Q96KH6 178 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 SPXQ9BT56 116 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 PLEK2Q9NYT0 353 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 EHFQ9NZC4 300 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 AK3Q9UIJ7 227 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 PIGLQ9Y2B2 252 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 FAM230AA0A1W2PPH8 454 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 C5orf63A6NC05 138 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 PDCD6O75340 191 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 PITX3O75364 302 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 ACTL6BO94805 426 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 ELLP55199 621 aaPredicted RBP4.52□□□□□ -1.69
VPS41-203ENST00000395969 SNU13P55769 128 aaKnown RBP4.52□□□□□ -1.69
VPS41-203ENST00000395969 VAMP2P63027 116 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 ARG2P78540 354 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 RELBQ01201 579 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 EWSR1Q01844 656 aaKnown RBP eCLIP4.52□□□□□ -1.69
VPS41-203ENST00000395969 TLE4Q04727 773 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 MALLQ13021 153 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 LPAL2Q16609 132 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 DMRTC1Q5HYR2 192 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 CST9LP1Q5W188 147 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 WDR25Q64LD2 544 aaPredicted RBP4.52□□□□□ -1.69
VPS41-203ENST00000395969 GBGT1Q8N5D6 347 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 IL22RA1Q8N6P7 574 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 TCTEX1D1Q8N7M0 179 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 TMEM37Q8WXS4 190 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 ARHGAP5-AS1Q96IT6 56 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 FOXN4Q96NZ1 517 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 TAAR6Q96RI8 345 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 C20orf144Q9BQM9 153 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 RBM24Q9BX46 236 aaKnown RBP4.52□□□□□ -1.69
VPS41-203ENST00000395969 COL25A1Q9BXS0 654 aaPredicted RBP4.52□□□□□ -1.69
VPS41-203ENST00000395969 HES7Q9BYE0 225 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 GPR173Q9NS66 373 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 FBXL7Q9UJT9 491 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 ZFP30Q9Y2G7 519 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 PAM16Q9Y3D7 125 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 CEP290O15078 2479 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 MAP1BP46821 2468 aaKnown RBP4.52□□□□□ -1.69
VPS41-203ENST00000395969 IGKV1-12A0A0C4DH73 117 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 SPAARA0A1B0GVQ0 90 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 J3QT63 122 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 SPRY1O43609 319 aaPredicted RBP4.52□□□□□ -1.69
VPS41-203ENST00000395969 IGKV1D-12P01611 117 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 DBHP09172 617 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 OR10J1P30954 320 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 CDKN1BP46527 198 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 MRPL49Q13405 166 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms