RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 PROP1O75360 226 aa16.67■□□□□ 0.26
VCPKMT-202ENST00000395860 SIX6O95475 246 aa16.67■□□□□ 0.26
VCPKMT-202ENST00000395860 UCP1P25874 307 aa16.67■□□□□ 0.26
VCPKMT-202ENST00000395860 Q5PR19 223 aa16.67■□□□□ 0.26
VCPKMT-202ENST00000395860 C1orf122Q6ZSJ8 110 aa16.67■□□□□ 0.26
VCPKMT-202ENST00000395860 ZNF596Q8TC21 504 aa16.67■□□□□ 0.26
VCPKMT-202ENST00000395860 TCTEX1D2Q8WW35 142 aa16.67■□□□□ 0.26
VCPKMT-202ENST00000395860 FYTTD1Q96QD9 318 aaKnown RBP16.67■□□□□ 0.26
VCPKMT-202ENST00000395860 SIRT7Q9NRC8 400 aa16.67■□□□□ 0.26
VCPKMT-202ENST00000395860 POLR3KQ9Y2Y1 108 aaPredicted RBP16.67■□□□□ 0.26
VCPKMT-202ENST00000395860 KPTNQ9Y664 436 aa16.67■□□□□ 0.26
VCPKMT-202ENST00000395860 COX7A1P24310 79 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 PRRX1P54821 245 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 RPL30P62888 115 aaKnown RBP16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 PRB3Q04118 309 aaPredicted RBP16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 LRTM2Q8N967 370 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 OR5M8Q8NGP6 311 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 S1PR3Q99500 378 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 CHIAQ9BZP6 476 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 RAB18Q9NP72 206 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 FAM25EA8MYX2 175 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 ADAP1O75689 374 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 SERPINE2P07093 398 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 HOXB5P09067 269 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 HLA-GP17693 338 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 DUTP33316 252 aaKnown RBP16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 H2BFSP57053 126 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 C1orf229Q6ZS94 237 aaPredicted RBP16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 ZNF695Q8IW36 515 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 DRAXINQ8NBI3 349 aaPredicted RBP16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 OR13D1Q8NGV5 346 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 TNFRSF14Q92956 283 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 PPP1R14BQ96C90 147 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 ZNF251Q9BRH9 671 aa16.66■□□□□ 0.26
VCPKMT-202ENST00000395860 PTPN13Q12923 2485 aa16.65■□□□□ 0.26
VCPKMT-202ENST00000395860 LINC00473A8K010 186 aa16.65■□□□□ 0.26
VCPKMT-202ENST00000395860 PRTN3P24158 256 aa16.65■□□□□ 0.26
VCPKMT-202ENST00000395860 DCAF12L2Q5VW00 463 aa16.65■□□□□ 0.26
VCPKMT-202ENST00000395860 TMEM268Q5VZI3 342 aa16.65■□□□□ 0.26
VCPKMT-202ENST00000395860 PNKDQ8N490 385 aa16.65■□□□□ 0.26
VCPKMT-202ENST00000395860 LHFPL5Q8TAF8 219 aa16.65■□□□□ 0.26
VCPKMT-202ENST00000395860 TMEM56Q96MV1 263 aa16.65■□□□□ 0.26
VCPKMT-202ENST00000395860 TMEM56-RWDD3S4R434 201 aa16.65■□□□□ 0.26
VCPKMT-202ENST00000395860 CENPEQ02224 2701 aa16.65■□□□□ 0.26
VCPKMT-202ENST00000395860 C5orf51A6NDU8 294 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 CDS2O95674 445 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 HNRNPCP07910 306 aaKnown RBP eCLIP16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 DVL1P1P54792 670 aaPredicted RBP16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 LINC00205P59089 165 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 OR2B11Q5JQS5 317 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 GSG1LQ6UXU4 331 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 VMO1Q7Z5L0 202 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 C18orf12Q96KH6 178 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 PDCD10Q9BUL8 212 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 SIRPDQ9H106 197 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 HEXA-AS1Q9H8Q6 139 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 C13orf42A0A1B0GVH6 325 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 IFNA21P01568 189 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 GIPP09681 153 aaPredicted RBP16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 IL3RAP26951 378 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 PRSS57Q6UWY2 283 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 ZNF833PQ6ZTB9 187 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 SELENOHQ8IZQ5 122 aaKnown RBP16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 TCTE3Q8IZS6 198 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 TCTEX1D1Q8N7M0 179 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 SLC35G3Q8N808 338 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 BEND2Q8NDZ0 799 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 RBPMSQ93062 196 aaKnown RBP16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 TMEM186Q96B77 213 aa16.64■□□□□ 0.25
VCPKMT-202ENST00000395860 TOX4O94842 621 aa16.63■□□□□ 0.25
VCPKMT-202ENST00000395860 OR2A4O95047 310 aa16.63■□□□□ 0.25
VCPKMT-202ENST00000395860 IGLV1-47P01700 117 aa16.63■□□□□ 0.25
VCPKMT-202ENST00000395860 THBS3P49746 956 aa16.63■□□□□ 0.25
VCPKMT-202ENST00000395860 HLA-DRB5Q30154 266 aa16.63■□□□□ 0.25
VCPKMT-202ENST00000395860 NCR3LG1Q68D85 454 aa16.63■□□□□ 0.25
VCPKMT-202ENST00000395860 LYZL2Q7Z4W2 148 aa16.63■□□□□ 0.25
VCPKMT-202ENST00000395860 SPAG16Q8N0X2 631 aa16.63■□□□□ 0.25
VCPKMT-202ENST00000395860 IL22RA2Q969J5 263 aa16.63■□□□□ 0.25
VCPKMT-202ENST00000395860 OR2A7Q96R45 310 aa16.63■□□□□ 0.25
VCPKMT-202ENST00000395860 INSIG2Q9Y5U4 225 aa16.63■□□□□ 0.25
VCPKMT-202ENST00000395860 PIGBOS1A0A0B4J2F0 54 aa16.62■□□□□ 0.25
VCPKMT-202ENST00000395860 ZNF585BQ52M93 769 aa16.62■□□□□ 0.25
VCPKMT-202ENST00000395860 GGNBP1Q5YKI7 109 aa16.62■□□□□ 0.25
VCPKMT-202ENST00000395860 SEC22AQ96IW7 307 aa16.62■□□□□ 0.25
VCPKMT-202ENST00000395860 ADTRPQ96IZ2 230 aa16.62■□□□□ 0.25
VCPKMT-202ENST00000395860 PCGF1Q9BSM1 259 aa16.62■□□□□ 0.25
VCPKMT-202ENST00000395860 UNKLQ9H9P5 680 aaKnown RBP16.62■□□□□ 0.25
VCPKMT-202ENST00000395860 PRELID3BQ9Y3B1 194 aa16.62■□□□□ 0.25
VCPKMT-202ENST00000395860 APCP25054 2843 aa16.62■□□□□ 0.25
VCPKMT-202ENST00000395860 A0A096LNT2 108 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 BOLA2-SMG1P6H3BVE0 249 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 RAMP3O60896 148 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 LPAR6P43657 344 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 RAP2BP61225 183 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 ZNF816Q0VGE8 651 aaPredicted RBP16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 KLRD1Q13241 179 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 FAM71F2Q6NXP2 309 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 OR11H6Q8NGC7 330 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 ASB13Q8WXK3 278 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 FAM212BQ9NTI7 297 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms