RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 TCTEX1D1Q8N7M0 179 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 TPRX1Q8N7U7 411 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 OR52L2PQ8NGH6 319 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 ARL11Q969Q4 196 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 C5orf30Q96GV9 206 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 GAFA1Q96PS6 74 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 LINC00574Q9H8X3 128 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 CHODLQ9H9P2 273 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 OR6C3Q9NZP0 311 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 ZNF469Q96JG9 3925 aaPredicted RBP12.48□□□□□ -0.41
SCAF11-204ENST00000395454 ADAM20O43506 726 aa12.48□□□□□ -0.41
SCAF11-204ENST00000395454 IGKV1-39P01597 117 aa12.48□□□□□ -0.41
SCAF11-204ENST00000395454 IGKV1D-39P04432 117 aa12.48□□□□□ -0.41
SCAF11-204ENST00000395454 SERPINE2P07093 398 aa12.48□□□□□ -0.41
SCAF11-204ENST00000395454 MMP9P14780 707 aa12.48□□□□□ -0.41
SCAF11-204ENST00000395454 ID3Q02535 119 aa12.48□□□□□ -0.41
SCAF11-204ENST00000395454 ZNF585BQ52M93 769 aa12.48□□□□□ -0.41
SCAF11-204ENST00000395454 FAM201AQ5SY85 155 aa12.48□□□□□ -0.41
SCAF11-204ENST00000395454 BAP18Q8IXM2 172 aa12.48□□□□□ -0.41
SCAF11-204ENST00000395454 ZNRF1Q8ND25 227 aa12.48□□□□□ -0.41
SCAF11-204ENST00000395454 OR51H1Q8NH63 302 aa12.48□□□□□ -0.41
SCAF11-204ENST00000395454 MBD6Q96DN6 1003 aa12.48□□□□□ -0.41
SCAF11-204ENST00000395454 LSM5Q9Y4Y9 91 aaKnown RBP12.48□□□□□ -0.41
SCAF11-204ENST00000395454 A0A1B0GU03 582 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 TMEM178BH3BS89 294 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 ITGB1BP1O14713 200 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 LOXL3P58215 753 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 EDDM3AQ14507 147 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 ZNF665Q9H7R5 613 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 OR2S2Q9NQN1 319 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 KCNS2Q9ULS6 477 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 SIGLEC5O15389 551 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 PPIHO43447 177 aaKnown RBP12.47□□□□□ -0.41
SCAF11-204ENST00000395454 YPEL1O60688 119 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 SCGB1D2O95969 90 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 PPP1CCP36873 323 aaKnown RBP12.47□□□□□ -0.41
SCAF11-204ENST00000395454 NKX2-1P43699 371 aaPredicted RBP12.47□□□□□ -0.41
SCAF11-204ENST00000395454 COMMD7Q86VX2 200 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 FOXRED2Q8IWF2 684 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 PDZD9Q8IXQ8 264 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 PCNPQ8WW12 178 aaKnown RBP12.47□□□□□ -0.41
SCAF11-204ENST00000395454 EDARADDQ8WWZ3 215 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 YPEL2Q96QA6 119 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 DCTN5Q9BTE1 182 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 OR2D2Q9H210 308 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 RAB9BQ9NP90 201 aa12.47□□□□□ -0.41
SCAF11-204ENST00000395454 RBM7Q9Y580 266 aaKnown RBP12.47□□□□□ -0.41
SCAF11-204ENST00000395454 A0A0G2JRQ6 117 aa12.46□□□□□ -0.42
SCAF11-204ENST00000395454 KIAA1324LA8MWY0 1029 aaPredicted RBP12.46□□□□□ -0.42
SCAF11-204ENST00000395454 LGALS8O00214 317 aa12.46□□□□□ -0.42
SCAF11-204ENST00000395454 GPR137BO60478 399 aa12.46□□□□□ -0.42
SCAF11-204ENST00000395454 EIF5AP63241 154 aaKnown RBP12.46□□□□□ -0.42
SCAF11-204ENST00000395454 TMEM30BQ3MIR4 351 aa12.46□□□□□ -0.42
SCAF11-204ENST00000395454 THOC7Q6I9Y2 204 aaKnown RBP12.46□□□□□ -0.42
SCAF11-204ENST00000395454 CLEC2AQ6UVW9 174 aa12.46□□□□□ -0.42
SCAF11-204ENST00000395454 LRRC75A-AS1Q8N1F1 130 aa12.46□□□□□ -0.42
SCAF11-204ENST00000395454 CORO2AQ92828 525 aa12.46□□□□□ -0.42
SCAF11-204ENST00000395454 REG4Q9BYZ8 158 aa12.46□□□□□ -0.42
SCAF11-204ENST00000395454 ARV1Q9H2C2 271 aa12.46□□□□□ -0.42
SCAF11-204ENST00000395454 FGF16O43320 207 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 IGKV1-5P01602 117 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 P0C879 139 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 PDLIM4P50479 330 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 TMEM33P57088 247 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 C17orf58Q2M2W7 97 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 FAM53AQ6NSI3 398 aaPredicted RBP12.45□□□□□ -0.42
SCAF11-204ENST00000395454 ZNF66Q6ZN08 573 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 TCF23Q7RTU1 214 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 EIF4E3Q8N5X7 224 aaKnown RBP12.45□□□□□ -0.42
SCAF11-204ENST00000395454 DEFB108BQ8NET1 73 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 LRRC20Q8TCA0 184 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 FAM168AQ92567 244 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 TIMD4Q96H15 378 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 CITED4Q96RK1 184 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 COA4Q9NYJ1 87 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 FBXL17Q9UF56 701 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 PPIAL4EA0A075B759 164 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 MFSD2BA6NFX1 497 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 PPIAL4DF5H284 164 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 TNFRSF13BO14836 293 aaPredicted RBP12.45□□□□□ -0.42
SCAF11-204ENST00000395454 PPIAL4FP0DN26 164 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 SELLP14151 372 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 CLEC12BQ2HXU8 276 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 MORN2Q502X0 79 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 AVPI1Q5T686 147 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 UBAC2Q8NBM4 344 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 GPR146Q96CH1 333 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 CXorf58Q96LI9 332 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 HSD17B10Q99714 261 aaKnown RBP12.45□□□□□ -0.42
SCAF11-204ENST00000395454 CALYQ9NYX4 217 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 GAB2Q9UQC2 676 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 PPIAL4AQ9Y536 164 aa12.45□□□□□ -0.42
SCAF11-204ENST00000395454 JTBO76095 146 aa12.44□□□□□ -0.42
SCAF11-204ENST00000395454 GPR6P46095 362 aaPredicted RBP12.44□□□□□ -0.42
SCAF11-204ENST00000395454 CATR1Q13166 79 aa12.44□□□□□ -0.42
SCAF11-204ENST00000395454 CXorf66Q5JRM2 361 aaPredicted RBP12.44□□□□□ -0.42
SCAF11-204ENST00000395454 Q5PR19 223 aa12.44□□□□□ -0.42
SCAF11-204ENST00000395454 RAB1CQ92928 201 aa12.44□□□□□ -0.42
SCAF11-204ENST00000395454 BPESC1Q9GZL8 116 aa12.44□□□□□ -0.42
SCAF11-204ENST00000395454 LYRM2Q9NU23 88 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms