RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 ZNF385AQ96PM9 386 aaKnown RBP13.44□□□□□ -0.26
SPOCK1-202ENST00000394945 RASL10BQ96S79 203 aa13.44□□□□□ -0.26
SPOCK1-202ENST00000394945 NCBP2LA6PVI3 153 aaKnown RBP13.44□□□□□ -0.26
SPOCK1-202ENST00000394945 MAS1LP35410 378 aa13.44□□□□□ -0.26
SPOCK1-202ENST00000394945 CEBPDP49716 269 aaPredicted RBP13.44□□□□□ -0.26
SPOCK1-202ENST00000394945 CLDND2Q8NHS1 167 aa13.44□□□□□ -0.26
SPOCK1-202ENST00000394945 PRNDQ9UKY0 176 aa13.44□□□□□ -0.26
SPOCK1-202ENST00000394945 IGHV1OR21-1A0A087WYE8 117 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 BTF3P20290 206 aaKnown RBP13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 Q96M66 194 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 RTBDNQ9BSG5 229 aaPredicted RBP13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 FZR1Q9UM11 496 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 SCN4AP35499 1836 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 TFPI2P48307 235 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 UCP3P55916 312 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 SPRED2Q7Z698 418 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 PAXXQ9BUH6 204 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 AKIRIN1Q9H9L7 192 aaPredicted RBP13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 CLDN16Q9Y5I7 305 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 CNOT1A5YKK6 2376 aaKnown RBP13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 TMSB15BA0A087X1C1 80 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 LOC107984156A0A0G2JMH3 177 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 A0A1W2PPE3 182 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 DLEU1O43261 78 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 ARL14EPLP0DKL9 152 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 ARL17AQ8IVW1 177 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 MTURNQ8N3F0 131 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 FAM117AQ9C073 453 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 FAM90A26D6RGX4 464 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 VSTM2AQ8TAG5 236 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 PERPQ96FX8 193 aa13.43□□□□□ -0.26
SPOCK1-202ENST00000394945 C3orf80F5H4A9 247 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 KLF3P57682 345 aaPredicted RBP13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 TMEM170AQ8WVE7 144 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 SPSB4Q96A44 273 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 SARAFQ96BY9 339 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 GUCD1Q96NT3 240 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 FOXD3Q9UJU5 478 aaPredicted RBP13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 SIT1Q9Y3P8 196 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 DOCK5Q9H7D0 1870 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 SCN2AQ99250 2005 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 SYNGR1O43759 233 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 S1PR2O95136 353 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 FGF12P61328 243 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 HYAL1Q12794 435 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 RNPS1Q15287 305 aaKnown RBP13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 FAM27BQ5VT28 67 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 MYOZ3Q8TDC0 251 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 TM4SF19Q96DZ7 209 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 LHFPL6Q9Y693 200 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 OTOFQ9HC10 1997 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 J3QR06 171 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 CRYBB3P26998 211 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 MRPL37Q9BZE1 423 aaKnown RBP13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 TMEM106BQ9NUM4 274 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 AP5S1Q9NUS5 200 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 PILRAQ9UKJ1 303 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 A6NNC1 897 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 KLF7O75840 302 aaPredicted RBP13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 P2RY6Q15077 328 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 LINC00596Q86U02 117 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 TMEM70Q9BUB7 260 aa13.42□□□□□ -0.26
SPOCK1-202ENST00000394945 ERASQ7Z444 233 aa13.41□□□□□ -0.26
SPOCK1-202ENST00000394945 ORM1P02763 201 aa13.41□□□□□ -0.26
SPOCK1-202ENST00000394945 HERVK_113P61574 105 aa13.41□□□□□ -0.26
SPOCK1-202ENST00000394945 PCOLCE2Q9UKZ9 415 aa13.41□□□□□ -0.26
SPOCK1-202ENST00000394945 ICAM4Q14773 271 aa13.41□□□□□ -0.26
SPOCK1-202ENST00000394945 ZNF818PQ6ZRF7 136 aa13.41□□□□□ -0.26
SPOCK1-202ENST00000394945 C1QL4Q86Z23 238 aa13.41□□□□□ -0.26
SPOCK1-202ENST00000394945 GTF3AQ92664 365 aaKnown RBP13.41□□□□□ -0.26
SPOCK1-202ENST00000394945 TINAGQ9UJW2 476 aa13.41□□□□□ -0.26
SPOCK1-202ENST00000394945 GAS1P54826 345 aa13.41□□□□□ -0.26
SPOCK1-202ENST00000394945 C2orf88Q9BSF0 95 aa13.41□□□□□ -0.26
SPOCK1-202ENST00000394945 PRDM13Q9H4Q3 707 aa13.41□□□□□ -0.26
SPOCK1-202ENST00000394945 F5H697 171 aa13.4□□□□□ -0.26
SPOCK1-202ENST00000394945 AMBPP02760 352 aa13.4□□□□□ -0.26
SPOCK1-202ENST00000394945 ST6GALNAC6Q969X2 333 aa13.4□□□□□ -0.26
SPOCK1-202ENST00000394945 CXXC4Q9H2H0 198 aa13.4□□□□□ -0.26
SPOCK1-202ENST00000394945 MT-CO3P00414 261 aa13.4□□□□□ -0.26
SPOCK1-202ENST00000394945 LINC00869P0C866 280 aa13.4□□□□□ -0.26
SPOCK1-202ENST00000394945 GPR35Q9HC97 309 aa13.4□□□□□ -0.26
SPOCK1-202ENST00000394945 NDUFB3O43676 98 aa13.4□□□□□ -0.26
SPOCK1-202ENST00000394945 CXCL1P09341 107 aa13.4□□□□□ -0.26
SPOCK1-202ENST00000394945 ZG16O60844 167 aa13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 SERF1AO75920 110 aa13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 CRYABP02511 175 aaKnown RBP13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 EPHA8P29322 1005 aaPredicted RBP13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 LDLRAD2Q5SZI1 272 aa13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 RHBDD2Q6NTF9 364 aa13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 ZNF721Q8TF20 911 aa13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 CDX2Q99626 313 aaPredicted RBP13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 hADV38S2A0JD32 116 aa13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 RPL23P62829 140 aaKnown RBP13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 CCL7P80098 99 aa13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 GBGT1Q8N5D6 347 aa13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 PHF7Q9BWX1 381 aaPredicted RBP13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 GAL3ST2Q9H3Q3 398 aa13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 EP300Q09472 2414 aaPredicted RBP13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 ZNF646O15015 1829 aaPredicted RBP13.39□□□□□ -0.27
SPOCK1-202ENST00000394945 TMEM229AB2RXF0 380 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms