RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 C17orf98A8MV24 154 aa18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 C15orf65H3BRN8 121 aa18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 S1PR2O95136 353 aa18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 IGHV3-13P01766 116 aa18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 HOXA4Q00056 320 aaPredicted RBP18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 TAF15Q92804 592 aaKnown RBP eCLIP18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 SNX22Q96L94 193 aa18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 ESRP2Q9H6T0 727 aaKnown RBP18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 DUSP13Q9UII6 198 aa18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 LOC102723971A0A1B0GUV8 181 aa18.58■□□□□ 0.57
NKX2-1-201ENST00000354822 ZNF737O75373 536 aa18.58■□□□□ 0.57
NKX2-1-201ENST00000354822 MAS1LP35410 378 aa18.58■□□□□ 0.57
NKX2-1-201ENST00000354822 BRWD1-AS2P59051 145 aa18.58■□□□□ 0.57
NKX2-1-201ENST00000354822 TMEM41BQ5BJD5 291 aa18.58■□□□□ 0.57
NKX2-1-201ENST00000354822 H2BFWTQ7Z2G1 175 aa18.58■□□□□ 0.57
NKX2-1-201ENST00000354822 ZNF429Q86V71 674 aa18.58■□□□□ 0.57
NKX2-1-201ENST00000354822 ISOC2Q96AB3 205 aa18.58■□□□□ 0.57
NKX2-1-201ENST00000354822 INTS1Q8N201 2190 aaKnown RBP18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 A0A1W2PPH5 198 aa18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 CRYAAP02489 173 aa18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 TFF1P04155 84 aa18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 RAB5AP20339 215 aa18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 GLRXP35754 106 aa18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 CR1LQ2VPA4 569 aa18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 OR2B11Q5JQS5 317 aa18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 Q6ZS92 163 aa18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 CENPVQ7Z7K6 275 aaPredicted RBP18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 ZFP82Q8N141 532 aa18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 TPRX1Q8N7U7 411 aa18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 C2CD4CQ8TF44 421 aa18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 NIPSNAP3BQ9BS92 247 aa18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 AGMATQ9BSE5 352 aa18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 LRFN3Q9BTN0 628 aa18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 MRPL37Q9BZE1 423 aaKnown RBP18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 CISD1Q9NZ45 108 aaKnown RBP18.58■□□□□ 0.56
NKX2-1-201ENST00000354822 A0A087WWC5 75 aa18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 MGST3O14880 152 aa18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 AGAP20933 346 aa18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 ZNF83P51522 516 aa18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 ZNF787Q6DD87 383 aa18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 FAM53AQ6NSI3 398 aaPredicted RBP18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 CYB561D1Q8N8Q1 229 aa18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 RFESDQ8TAC1 157 aa18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 MUCL1Q96DR8 90 aa18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 MALSU1Q96EH3 234 aa18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 TVP23CQ96ET8 276 aa18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 CNOT1A5YKK6 2376 aaKnown RBP18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 AKR1D1P51857 326 aa18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 BTNL3Q6UXE8 466 aa18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 SLC35E3Q7Z769 313 aa18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 PSG11Q9UQ72 335 aa18.57■□□□□ 0.56
NKX2-1-201ENST00000354822 FRYQ5TBA9 3013 aa18.56■□□□□ 0.56
NKX2-1-201ENST00000354822 OR2C1O95371 312 aa18.56■□□□□ 0.56
NKX2-1-201ENST00000354822 ARG1P05089 322 aa18.56■□□□□ 0.56
NKX2-1-201ENST00000354822 TIMP3P35625 211 aa18.56■□□□□ 0.56
NKX2-1-201ENST00000354822 PMS2P11Q13670 270 aa18.56■□□□□ 0.56
NKX2-1-201ENST00000354822 OR8G2PQ6IF36 304 aa18.56■□□□□ 0.56
NKX2-1-201ENST00000354822 ZNF474Q6S9Z5 364 aaPredicted RBP18.56■□□□□ 0.56
NKX2-1-201ENST00000354822 FAM24BQ8N5W8 94 aa18.56■□□□□ 0.56
NKX2-1-201ENST00000354822 S100PBPQ96BU1 408 aa18.56■□□□□ 0.56
NKX2-1-201ENST00000354822 GNG13Q9P2W3 67 aa18.56■□□□□ 0.56
NKX2-1-201ENST00000354822 JPT1Q9UK76 154 aa18.56■□□□□ 0.56
NKX2-1-201ENST00000354822 IGKV1D-17A0A075B6S4 117 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 IGHV3-43A0A0B4J1X8 118 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 M0R1B8 84 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 LY86O95711 162 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 CRYABP02511 175 aaKnown RBP18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 IGHV3-43DP0DP04 118 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 EDDM3AQ14507 147 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 C1orf185Q5T7R7 199 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 DTD1Q8TEA8 209 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 RAB39BQ96DA2 213 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 A0A1W2PPE2 198 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 BCL2P10415 239 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 EGR1P18146 543 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 TAGLN2P37802 199 aaKnown RBP18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 CEBPGP53567 150 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 KLF3P57682 345 aaPredicted RBP18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 RPS23P62266 143 aaKnown RBP18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 Q3ZCU0 254 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 LRP11Q86VZ4 500 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 OR10P1Q8NGE3 313 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 RCC1LQ96I51 464 aaKnown RBP18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 P2RX4Q99571 388 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 TMEM147Q9BVK8 224 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 VSIRQ9H7M9 311 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 HEATR1Q9H583 2144 aaKnown RBP18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 CACNA1DQ01668 2161 aa18.55■□□□□ 0.56
NKX2-1-201ENST00000354822 LINC00473A8K010 186 aa18.54■□□□□ 0.56
NKX2-1-201ENST00000354822 ST8SIA5O15466 376 aa18.54■□□□□ 0.56
NKX2-1-201ENST00000354822 KLK10O43240 276 aa18.54■□□□□ 0.56
NKX2-1-201ENST00000354822 YPEL1O60688 119 aa18.54■□□□□ 0.56
NKX2-1-201ENST00000354822 RPL35P42766 123 aaKnown RBP18.54■□□□□ 0.56
NKX2-1-201ENST00000354822 GPR12P47775 334 aa18.54■□□□□ 0.56
NKX2-1-201ENST00000354822 LCN15Q6UWW0 184 aa18.54■□□□□ 0.56
NKX2-1-201ENST00000354822 YPEL2Q96QA6 119 aa18.54■□□□□ 0.56
NKX2-1-201ENST00000354822 FAM215AQ9Y5M1 114 aa18.54■□□□□ 0.56
NKX2-1-201ENST00000354822 UBE2L5PA0A1B0GUS4 154 aa18.54■□□□□ 0.56
NKX2-1-201ENST00000354822 DEFB108AA8MXU0 73 aa18.54■□□□□ 0.56
NKX2-1-201ENST00000354822 IFNA1P01562 189 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms