RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 SLC22A1O15245 554 aa12.09□□□□□ -0.47
DDX55-202ENST00000354291 BPNT1O95861 308 aa12.09□□□□□ -0.47
DDX55-202ENST00000354291 BLVRBP30043 206 aaPredicted RBP12.09□□□□□ -0.47
DDX55-202ENST00000354291 CHRNA7P36544 502 aa12.09□□□□□ -0.47
DDX55-202ENST00000354291 PPP1CCP36873 323 aaKnown RBP12.09□□□□□ -0.47
DDX55-202ENST00000354291 PMS2P11Q13670 270 aa12.09□□□□□ -0.47
DDX55-202ENST00000354291 IRF3Q14653 427 aa12.09□□□□□ -0.47
DDX55-202ENST00000354291 ECSCRQ19T08 205 aa12.09□□□□□ -0.47
DDX55-202ENST00000354291 LIPKQ5VXJ0 399 aa12.09□□□□□ -0.47
DDX55-202ENST00000354291 C6orf201Q7Z4U5 140 aa12.09□□□□□ -0.47
DDX55-202ENST00000354291 OR6M1Q8NGM8 313 aa12.09□□□□□ -0.47
DDX55-202ENST00000354291 UFD1Q92890 307 aa12.09□□□□□ -0.47
DDX55-202ENST00000354291 TM2D1Q9BX74 207 aa12.09□□□□□ -0.47
DDX55-202ENST00000354291 PLEKHJ1Q9NW61 149 aa12.09□□□□□ -0.47
DDX55-202ENST00000354291 STEAP1Q9UHE8 339 aa12.09□□□□□ -0.47
DDX55-202ENST00000354291 IGHV7-81A0A0B4J1V7 117 aa12.08□□□□□ -0.48
DDX55-202ENST00000354291 TMEM14DPA8MWL7 114 aa12.08□□□□□ -0.48
DDX55-202ENST00000354291 DEDDO75618 318 aa12.08□□□□□ -0.48
DDX55-202ENST00000354291 GNMTQ14749 295 aa12.08□□□□□ -0.48
DDX55-202ENST00000354291 TRAM1Q15629 374 aa12.08□□□□□ -0.48
DDX55-202ENST00000354291 HMGN3Q15651 99 aa12.08□□□□□ -0.48
DDX55-202ENST00000354291 OR2AK2Q8NG84 335 aa12.08□□□□□ -0.48
DDX55-202ENST00000354291 TMEM203Q969S6 136 aa12.08□□□□□ -0.48
DDX55-202ENST00000354291 URM1Q9BTM9 101 aaKnown RBP12.08□□□□□ -0.48
DDX55-202ENST00000354291 RIMS4Q9H426 269 aaPredicted RBP12.08□□□□□ -0.48
DDX55-202ENST00000354291 DUSP21Q9H596 190 aa12.08□□□□□ -0.48
DDX55-202ENST00000354291 A3GALT2U3KPV4 340 aa12.08□□□□□ -0.48
DDX55-202ENST00000354291 SOX15O60248 233 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 NAPSAO96009 420 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 HSMCR30P0CW71 290 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 PSMA1P25786 263 aaKnown RBP12.07□□□□□ -0.48
DDX55-202ENST00000354291 RANBP1P43487 201 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 AQP4P55087 323 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 ACTBP60709 375 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 QRFPP83859 136 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 UNC119Q13432 240 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 TPBGQ13641 420 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 ZNF833PQ6ZTB9 187 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 MOB1BQ7L9L4 216 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 C5orf24Q7Z6I8 188 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 ODF3L1Q8IXM7 274 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 IL1F10Q8WWZ1 152 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 CYYR1Q96J86 154 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 RITA1Q96K30 269 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 MS4A10Q96PG2 267 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 ZNF251Q9BRH9 671 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 NICN1Q9BSH3 213 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 ANKRD60Q9BZ19 345 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 PLEKHA3Q9HB20 300 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 CHMP1AQ9HD42 196 aaPredicted RBP12.07□□□□□ -0.48
DDX55-202ENST00000354291 PIPOXQ9P0Z9 390 aa12.07□□□□□ -0.48
DDX55-202ENST00000354291 RAB29O14966 203 aa12.06□□□□□ -0.48
DDX55-202ENST00000354291 RGS10O43665 173 aa12.06□□□□□ -0.48
DDX55-202ENST00000354291 ARL6IP5O75915 188 aa12.06□□□□□ -0.48
DDX55-202ENST00000354291 CNIH1O95406 144 aa12.06□□□□□ -0.48
DDX55-202ENST00000354291 HLA-DRB1P01911 266 aa12.06□□□□□ -0.48
DDX55-202ENST00000354291 LIN54Q6MZP7 749 aa12.06□□□□□ -0.48
DDX55-202ENST00000354291 FAM71F2Q6NXP2 309 aa12.06□□□□□ -0.48
DDX55-202ENST00000354291 ZNF880Q6PDB4 577 aa12.06□□□□□ -0.48
DDX55-202ENST00000354291 LINC00322Q6ZN03 302 aaPredicted RBP12.06□□□□□ -0.48
DDX55-202ENST00000354291 SVOPQ8N4V2 548 aa12.06□□□□□ -0.48
DDX55-202ENST00000354291 NRG4Q8WWG1 115 aa12.06□□□□□ -0.48
DDX55-202ENST00000354291 MRPL20Q9BYC9 149 aaKnown RBP12.06□□□□□ -0.48
DDX55-202ENST00000354291 PLGRKTQ9HBL7 147 aa12.06□□□□□ -0.48
DDX55-202ENST00000354291 MGAT4AQ9UM21 535 aa12.06□□□□□ -0.48
DDX55-202ENST00000354291 FOXA2Q9Y261 457 aaPredicted RBP12.06□□□□□ -0.48
DDX55-202ENST00000354291 SAA2-SAA4A0A096LPE2 208 aa12.05□□□□□ -0.48
DDX55-202ENST00000354291 TRBV6-6A0A0A6YYG2 114 aa12.05□□□□□ -0.48
DDX55-202ENST00000354291 SHISA3A0PJX4 238 aa12.05□□□□□ -0.48
DDX55-202ENST00000354291 SLC17A2O00624 439 aa12.05□□□□□ -0.48
DDX55-202ENST00000354291 ARPC1BO15143 372 aaKnown RBP12.05□□□□□ -0.48
DDX55-202ENST00000354291 NBR2O15453 112 aa12.05□□□□□ -0.48
DDX55-202ENST00000354291 SAA2P0DJI9 122 aaPredicted RBP12.05□□□□□ -0.48
DDX55-202ENST00000354291 OR3A3P47888 321 aa12.05□□□□□ -0.48
DDX55-202ENST00000354291 MLLT11Q13015 90 aaPredicted RBP12.05□□□□□ -0.48
DDX55-202ENST00000354291 TMEM91Q6ZNR0 172 aa12.05□□□□□ -0.48
DDX55-202ENST00000354291 FAM89BQ8N5H3 189 aa12.05□□□□□ -0.48
DDX55-202ENST00000354291 SETD6Q8TBK2 473 aa12.05□□□□□ -0.48
DDX55-202ENST00000354291 THAP7Q9BT49 309 aaPredicted RBP12.05□□□□□ -0.48
DDX55-202ENST00000354291 LPAR5Q9H1C0 372 aa12.05□□□□□ -0.48
DDX55-202ENST00000354291 VCX3BQ9H321 246 aa12.05□□□□□ -0.48
DDX55-202ENST00000354291 KCNK15Q9H427 330 aa12.05□□□□□ -0.48
DDX55-202ENST00000354291 HSF4Q9ULV5 492 aa12.05□□□□□ -0.48
DDX55-202ENST00000354291 ABCA13Q86UQ4 5058 aa12.04□□□□□ -0.48
DDX55-202ENST00000354291 ITGB1BP1O14713 200 aa12.04□□□□□ -0.48
DDX55-202ENST00000354291 CPEP16870 476 aa12.04□□□□□ -0.48
DDX55-202ENST00000354291 PSMD7P51665 324 aa12.04□□□□□ -0.48
DDX55-202ENST00000354291 P2RY14Q15391 338 aa12.04□□□□□ -0.48
DDX55-202ENST00000354291 PRSS48Q7RTY5 328 aa12.04□□□□□ -0.48
DDX55-202ENST00000354291 NPBQ8NG41 125 aa12.04□□□□□ -0.48
DDX55-202ENST00000354291 ABHD5Q8WTS1 349 aa12.04□□□□□ -0.48
DDX55-202ENST00000354291 CCDC90BQ9GZT6 254 aa12.04□□□□□ -0.48
DDX55-202ENST00000354291 IFI27L2Q9H2X8 130 aa12.04□□□□□ -0.48
DDX55-202ENST00000354291 SLC23A1Q9UHI7 598 aa12.04□□□□□ -0.48
DDX55-202ENST00000354291 AK6Q9Y3D8 172 aaKnown RBP12.04□□□□□ -0.48
DDX55-202ENST00000354291 FBXO7Q9Y3I1 522 aa12.04□□□□□ -0.48
DDX55-202ENST00000354291 VPS13DQ5THJ4 4388 aa12.04□□□□□ -0.48
DDX55-202ENST00000354291 A0A0A6YYD4 124 aa12.03□□□□□ -0.48
DDX55-202ENST00000354291 IZUMO1RA6ND01 250 aa12.03□□□□□ -0.48
DDX55-202ENST00000354291 ST8SIA5O15466 376 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms