RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 A0A1W2PQU0 124 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 SS18L1O75177 396 aaPredicted RBP5.42□□□□□ -1.54
VCAN-203ENST00000343200 GJB5O95377 273 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 LGALS7P47929 136 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 MZB1Q8WU39 189 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 WRAP73Q9P2S5 460 aaPredicted RBP5.42□□□□□ -1.54
VCAN-203ENST00000343200 ZNF831Q5JPB2 1677 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 C1SP09871 688 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 AGBL5Q8NDL9 886 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 C19orf24Q9BVV8 132 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 SNED1Q8TER0 1413 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 HOXA3O43365 443 aaPredicted RBP5.42□□□□□ -1.54
VCAN-203ENST00000343200 PLAUP00749 431 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 LPAR6P43657 344 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 OR3A4PP47883 348 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 MMDQ15546 238 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 SPINK9Q5DT21 86 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 RGS7BPQ6MZT1 257 aaPredicted RBP5.42□□□□□ -1.54
VCAN-203ENST00000343200 TCTN3Q6NUS6 607 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 OSTM1Q86WC4 334 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 OR52M1Q8NGK5 317 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 TUBA4BQ9H853 241 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 TRAV12-3A0A0B4J271 114 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 ID1P41134 155 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 ERVK11-1P61568 191 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 FCGR3BO75015 233 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 EML2O95834 649 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 FKBP1BP68106 108 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 CLEC2AQ6UVW9 174 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 SLCO4C1Q6ZQN7 724 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 RNF182Q8N6D2 247 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 NPEPL1Q8NDH3 523 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 NT5CQ8TCD5 201 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 LPAR2Q9HBW0 351 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 TUBD1Q9UJT1 453 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 HIGD1AQ9Y241 93 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 NRXN3Q9Y4C0 1643 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 PDCD6O75340 191 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 CA6P23280 308 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 P2RY6Q15077 328 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 MESTQ5EB52 335 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 PAQR9Q6ZVX9 377 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 WDTC1Q8N5D0 677 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 NOXO1Q8NFA2 376 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 FAM174AQ8TBP5 190 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 TM4SF18Q96CE8 201 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 SLC25A37Q9NYZ2 338 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 ONECUT1Q9UBC0 465 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 ERRFI1Q9UJM3 462 aaPredicted RBP5.41□□□□□ -1.54
VCAN-203ENST00000343200 CAPZBP47756 277 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 EFNB1P98172 346 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 MEIG1Q5JSS6 88 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 ZNF683Q8IZ20 524 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 NPFFR1Q9GZQ6 430 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 TRBV7-9A0A0J9YWB2 115 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 FAM157AC9JC47 383 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 LIM2P55344 173 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 FBXL14Q8N1E6 418 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 ABHD17CQ6PCB6 329 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 PQLC2Q6ZP29 291 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 BCORP1Q8N888 145 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 IL36RNQ9UBH0 155 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 PLPP1O14494 284 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 SPRY1O43609 319 aaPredicted RBP5.41□□□□□ -1.54
VCAN-203ENST00000343200 C12orf73Q69YU5 71 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 HSD11B1LQ7Z5J1 315 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 ADAD2Q8NCV1 583 aaKnown RBP5.41□□□□□ -1.54
VCAN-203ENST00000343200 YAE1D1Q9NRH1 226 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 FGF21Q9NSA1 209 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 NHP2Q9NX24 153 aaKnown RBP5.41□□□□□ -1.54
VCAN-203ENST00000343200 hADV38S2A0JD32 116 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 A6NNC1 897 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 SLC25A30Q5SVS4 291 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 SHISA6Q6ZSJ9 500 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 MMD2Q8IY49 270 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 OR4D11Q8NGI4 311 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 HES7Q9BYE0 225 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 TMEM106BQ9NUM4 274 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 IL17CQ9P0M4 197 aa5.41□□□□□ -1.54
VCAN-203ENST00000343200 TMEFF2Q9UIK5 374 aaPredicted RBP5.41□□□□□ -1.54
VCAN-203ENST00000343200 PPIAL4EA0A075B759 164 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 PPIAL4FP0DN26 164 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 SUMO2P61956 95 aaKnown RBP5.4□□□□□ -1.54
VCAN-203ENST00000343200 Q6AWC8 147 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 Q6ZSR9 355 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 GPR27Q9NS67 375 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 PPIAL4AQ9Y536 164 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 UPK1AO00322 258 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 CLDN2P57739 230 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 MBNL2Q5VZF2 373 aaKnown RBP5.4□□□□□ -1.54
VCAN-203ENST00000343200 RASL11AQ6T310 242 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 C10orf111Q8N326 155 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 GTF3AQ92664 365 aaKnown RBP5.4□□□□□ -1.54
VCAN-203ENST00000343200 MRGPRFQ96AM1 343 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 ZNF764Q96H86 408 aaPredicted RBP5.4□□□□□ -1.54
VCAN-203ENST00000343200 ZNF346Q9UL40 294 aaKnown RBP5.4□□□□□ -1.54
VCAN-203ENST00000343200 ZNF815PA8K554 130 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 C3orf80F5H4A9 247 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 PFN3P60673 137 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 CEACAM21Q3KPI0 293 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms