RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 HCP5Q6MZN7 132 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 ETV3LQ6ZN32 361 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 NPRL2Q8WTW4 380 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 ITLN1Q8WWA0 313 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF48Q96MX3 618 aaPredicted RBP4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 DCTN5Q9BTE1 182 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 WFDC1Q9HC57 220 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 CALYQ9NYX4 217 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 MBD2Q9UBB5 411 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 CTSZQ9UBR2 303 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 WNT9BO14905 357 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 JTBO76095 146 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 OR4A8P0C604 315 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 RCC1P18754 421 aaPredicted RBP4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 THBS3P49746 956 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 RAB32Q13637 225 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 PRAMEF6Q5VXH4 476 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF546Q86UE3 836 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 HAPLN4Q86UW8 402 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 MBD3L1Q8WWY6 194 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 ELMOD3Q96FG2 381 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 ZC4H2Q9NQZ6 224 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 DMXL2Q8TDJ6 3036 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 AKAP9Q99996 3911 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 TRAV38-1A0A0B4J264 116 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 A8MV72 311 aaPredicted RBP4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 OOSP1A8MZH6 123 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 SEC14L6B5MCN3 397 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 M0R1B8 84 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 ATG12O94817 140 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 HPRT1P00492 218 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 TNFSF4P23510 183 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF134P52741 427 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 ATP6V1FQ16864 119 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 C19orf54Q5BKX5 351 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 RNASE12Q5GAN4 147 aaKnown RBP4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 C9orf135Q5VTT2 229 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 RAB1CQ92928 201 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 GPR146Q96CH1 333 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 TMEM106BQ9NUM4 274 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 STRAPQ9Y3F4 350 aaKnown RBP4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 DSCAMO60469 2012 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 ZFHX3Q15911 3703 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 hCG_1807616A0A1W2PRN6 198 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 L7N2F9 121 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 SDCBPO00560 298 aaPredicted RBP4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 ADAP1O75689 374 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF83P51522 516 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 RPL30P62888 115 aaKnown RBP4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 TNFAIP6P98066 277 aaPredicted RBP4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 RELBQ01201 579 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 C21orf62-AS1Q17RA5 79 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 KRBOX4Q5JUW0 171 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 LYZL2Q7Z4W2 148 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 OR11L1Q8NGX0 322 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 YPEL4Q96NS1 127 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 MFFQ9GZY8 342 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 CCL28Q9NRJ3 127 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 LSM4Q9Y4Z0 139 aaKnown RBP4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 LOC400499M0QZD8 3231 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 NDUFA3O95167 84 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 SPDEFO95238 335 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 FAM87AP0C7U9 286 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 EIF5AP63241 154 aaKnown RBP4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 NCR3LG1Q68D85 454 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 Q6ZRM9 215 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 C1orf87Q8N0U7 546 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 NPBQ8NG41 125 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 ATP6V0BQ99437 205 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 PLEKHF2Q9H8W4 249 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 MMP26Q9NRE1 261 aa4.39□□□□□ -1.71
PRPF4B-201ENST00000337659 LRRC30A6NM36 301 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 H3BSH0 61 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 PRB1P04280 392 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 RBMXP38159 391 aaKnown RBP4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 AANATQ16613 207 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 SCGB2B2Q4G0G5 96 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 CT45A1Q5HYN5 189 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 SPATA46Q5T0L3 261 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 BAP18Q8IXM2 172 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 CMTM1Q8IZ96 169 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 SPAG16Q8N0X2 631 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 OR1L1Q8NH94 360 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 CT45A3Q8NHU0 189 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 BEX2Q9BXY8 128 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 MED13LQ71F56 2210 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 CCDC168Q8NDH2 2452 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 IGSF23A1L1A6 192 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 LINC00473A8K010 186 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 TSPAN9O75954 239 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 CRYGCP07315 174 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 TPT1P13693 172 aaKnown RBP4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 FCGR2BP31994 310 aaPredicted RBP4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 HERV-K104P61576 105 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 BTBD17A6NE02 478 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 C15orf61A6NNL5 157 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 C22orf46C9J442 243 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 UMAD1C9J7I0 102 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 ST8SIA3O43173 380 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 RLN2P04090 185 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms