RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 MALRD1Q5VYJ5 2156 aa15.18■□□□□ 0.02
USP39-201ENST00000323701 YPEL1O60688 119 aa15.18■□□□□ 0.02
USP39-201ENST00000323701 SERPINE2P07093 398 aa15.18■□□□□ 0.02
USP39-201ENST00000323701 NMBP08949 121 aa15.18■□□□□ 0.02
USP39-201ENST00000323701 NFYBP25208 207 aa15.18■□□□□ 0.02
USP39-201ENST00000323701 S100GP29377 79 aa15.18■□□□□ 0.02
USP39-201ENST00000323701 TMEM200BQ69YZ2 307 aa15.18■□□□□ 0.02
USP39-201ENST00000323701 CORO2AQ92828 525 aa15.18■□□□□ 0.02
USP39-201ENST00000323701 YPEL2Q96QA6 119 aa15.18■□□□□ 0.02
USP39-201ENST00000323701 GFOD1Q9NXC2 390 aa15.18■□□□□ 0.02
USP39-201ENST00000323701 CHD6Q8TD26 2715 aa15.18■□□□□ 0.02
USP39-201ENST00000323701 C17orf98A8MV24 154 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 K7EPK0 472 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 DEDDO75618 318 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 B3GALNT1O75752 331 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 NXPH3O95157 252 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 IGKV1-5P01602 117 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 ZNF345Q14585 488 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 RPL39P5Q59GN2 51 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 CT45A1Q5HYN5 189 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 ZNF843Q8N446 348 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 FAM71E2Q8N5Q1 922 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.17■□□□□ 0.02
USP39-201ENST00000323701 CT45A3Q8NHU0 189 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 LINC00574Q9H8X3 128 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 NDUFS7O75251 213 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 OR2F2O95006 317 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 VDAC1P21796 283 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 OR2F1Q13607 317 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 CXorf66Q5JRM2 361 aaPredicted RBP15.17■□□□□ 0.02
USP39-201ENST00000323701 DTX2Q86UW9 622 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 H1FXQ92522 213 aaKnown RBP15.17■□□□□ 0.02
USP39-201ENST00000323701 AIFM2Q9BRQ8 373 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 KAAG1Q9UBP8 84 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 LINC00312Q9Y6C7 94 aa15.17■□□□□ 0.02
USP39-201ENST00000323701 EPHA1P21709 976 aa15.16■□□□□ 0.02
USP39-201ENST00000323701 CDKN1AP38936 164 aa15.16■□□□□ 0.02
USP39-201ENST00000323701 INO80EQ8NBZ0 244 aaPredicted RBP15.16■□□□□ 0.02
USP39-201ENST00000323701 GPR146Q96CH1 333 aa15.16■□□□□ 0.02
USP39-201ENST00000323701 LIN7CQ9NUP9 197 aaKnown RBP15.16■□□□□ 0.02
USP39-201ENST00000323701 DOCK11Q5JSL3 2073 aa15.16■□□□□ 0.02
USP39-201ENST00000323701 MAP1AP78559 2803 aaPredicted RBP15.15■□□□□ 0.02
USP39-201ENST00000323701 A0A0D9SG52 128 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 ZNF729A6NN14 1252 aaPredicted RBP15.15■□□□□ 0.02
USP39-201ENST00000323701 TRIM77I1YAP6 450 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 NDUFB3O43676 98 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 IGHV2-70P01814 119 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 ZNF439Q8NDP4 499 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 IL22RA2Q969J5 263 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 UBTD1Q9HAC8 227 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 IDI2-AS1Q9NZ38 188 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 RCL1Q9Y2P8 373 aaKnown RBP15.15■□□□□ 0.02
USP39-201ENST00000323701 hADV38S2A0JD32 116 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 SNAPC5O75971 98 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 SPDEFO95238 335 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 NCR3LG1Q68D85 454 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 CLEC9AQ6UXN8 241 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 ZBTB34Q8NCN2 500 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 DMBX1Q8NFW5 382 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 SCARB1Q8WTV0 552 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 EDARADDQ8WWZ3 215 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 MAGT1Q9H0U3 335 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 RAB1BQ9H0U4 201 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 PLEKHF2Q9H8W4 249 aa15.15■□□□□ 0.02
USP39-201ENST00000323701 CSMD2Q7Z408 3487 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 CLEC18AA5D8T8 446 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 MFSD2BA6NFX1 497 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 TSPAN9O75954 239 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 CLDN1O95832 211 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 LPAR6P43657 344 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 GPR12P47775 334 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 GNG10P50151 68 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 ZNF816Q0VGE8 651 aaPredicted RBP15.14■□□□□ 0.01
USP39-201ENST00000323701 LRRC10Q5BKY1 277 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 ZNF841Q6ZN19 808 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 ODF3L1Q8IXM7 274 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 CLEC18CQ8NCF0 446 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 TCTEX1D2Q8WW35 142 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 CELSR2Q9HCU4 2923 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 A6NNC1 897 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 TEX46H3BTG2 121 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 HKR1P10072 659 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 POLR2GP62487 172 aaKnown RBP eCLIP15.14■□□□□ 0.01
USP39-201ENST00000323701 BSCL2Q96G97 398 aaPredicted RBP15.14■□□□□ 0.01
USP39-201ENST00000323701 ABHD14AQ9BUJ0 271 aa15.14■□□□□ 0.01
USP39-201ENST00000323701 RPUSD1Q9UJJ7 312 aaKnown RBP15.14■□□□□ 0.01
USP39-201ENST00000323701 CENPEQ02224 2701 aa15.13■□□□□ 0.01
USP39-201ENST00000323701 FAM208BQ5VWN6 2430 aa15.13■□□□□ 0.01
USP39-201ENST00000323701 DUXBA0A1W2PPF3 345 aa15.13■□□□□ 0.01
USP39-201ENST00000323701 BCL2L11O43521 198 aa15.13■□□□□ 0.01
USP39-201ENST00000323701 DUTP33316 252 aaKnown RBP15.13■□□□□ 0.01
USP39-201ENST00000323701 MEF2CQ06413 473 aaPredicted RBP15.13■□□□□ 0.01
USP39-201ENST00000323701 FAM122CQ6P4D5 195 aa15.13■□□□□ 0.01
USP39-201ENST00000323701 SPAG16Q8N0X2 631 aa15.13■□□□□ 0.01
USP39-201ENST00000323701 AQP10Q96PS8 301 aa15.13■□□□□ 0.01
USP39-201ENST00000323701 S1PR2O95136 353 aa15.12■□□□□ 0.01
USP39-201ENST00000323701 RLN2P04090 185 aa15.12■□□□□ 0.01
USP39-201ENST00000323701 PET100P0DJ07 73 aa15.12■□□□□ 0.01
USP39-201ENST00000323701 DAOP14920 347 aa15.12■□□□□ 0.01
USP39-201ENST00000323701 LINC00052Q96N35 136 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms