RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 GATAD1Q8WUU5 269 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 OR4F4Q96R69 305 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 POLDIP2Q9Y2S7 368 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 HMGB3O15347 200 aaKnown RBP16.06■□□□□ 0.16
RTN4-201ENST00000317610 GYPAP02724 150 aa16.06■□□□□ 0.16
RTN4-201ENST00000317610 RTP5Q14D33 572 aa16.06■□□□□ 0.16
RTN4-201ENST00000317610 C6orf15Q6UXA7 325 aaPredicted RBP16.06■□□□□ 0.16
RTN4-201ENST00000317610 ZNF664Q8N3J9 261 aa16.06■□□□□ 0.16
RTN4-201ENST00000317610 RAMP3O60896 148 aa16.06■□□□□ 0.16
RTN4-201ENST00000317610 RNF224P0DH78 156 aa16.06■□□□□ 0.16
RTN4-201ENST00000317610 COX5AP20674 150 aa16.06■□□□□ 0.16
RTN4-201ENST00000317610 FFAR4Q5NUL3 377 aa16.06■□□□□ 0.16
RTN4-201ENST00000317610 PEAR1Q5VY43 1037 aaPredicted RBP16.06■□□□□ 0.16
RTN4-201ENST00000317610 NEIL1Q96FI4 390 aaPredicted RBP16.06■□□□□ 0.16
RTN4-201ENST00000317610 THOC3Q96J01 351 aaKnown RBP16.06■□□□□ 0.16
RTN4-201ENST00000317610 OR51B6Q9H340 312 aa16.06■□□□□ 0.16
RTN4-201ENST00000317610 ODAMA1E959 279 aa16.05■□□□□ 0.16
RTN4-201ENST00000317610 ACOT6Q3I5F7 207 aaPredicted RBP16.05■□□□□ 0.16
RTN4-201ENST00000317610 CISD2Q8N5K1 135 aaKnown RBP16.05■□□□□ 0.16
RTN4-201ENST00000317610 OR2T10Q8NGZ9 312 aa16.05■□□□□ 0.16
RTN4-201ENST00000317610 C5orf30Q96GV9 206 aa16.05■□□□□ 0.16
RTN4-201ENST00000317610 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.05■□□□□ 0.16
RTN4-201ENST00000317610 OR6C3Q9NZP0 311 aa16.05■□□□□ 0.16
RTN4-201ENST00000317610 CLN8Q9UBY8 286 aa16.05■□□□□ 0.16
RTN4-201ENST00000317610 IL18BPO95998 194 aa16.05■□□□□ 0.16
RTN4-201ENST00000317610 G6PCP35575 357 aa16.05■□□□□ 0.16
RTN4-201ENST00000317610 RPL30P62888 115 aaKnown RBP16.05■□□□□ 0.16
RTN4-201ENST00000317610 MYPOPQ86VE0 399 aaPredicted RBP16.05■□□□□ 0.16
RTN4-201ENST00000317610 OR10P1Q8NGE3 313 aa16.05■□□□□ 0.16
RTN4-201ENST00000317610 NPCDR1Q9BY65 106 aa16.05■□□□□ 0.16
RTN4-201ENST00000317610 A0A1W2PPQ1 181 aa16.04■□□□□ 0.16
RTN4-201ENST00000317610 SH2D1BO14796 132 aa16.04■□□□□ 0.16
RTN4-201ENST00000317610 MAGEA5P43359 124 aa16.04■□□□□ 0.16
RTN4-201ENST00000317610 TFF3Q07654 80 aa16.04■□□□□ 0.16
RTN4-201ENST00000317610 BEND2Q8NDZ0 799 aa16.04■□□□□ 0.16
RTN4-201ENST00000317610 BCL2L2Q92843 193 aaPredicted RBP16.04■□□□□ 0.16
RTN4-201ENST00000317610 HES7Q9BYE0 225 aa16.04■□□□□ 0.16
RTN4-201ENST00000317610 TTTY12Q9BZ98 90 aa16.04■□□□□ 0.16
RTN4-201ENST00000317610 PATE3B3GLJ2 98 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 J3QW42 95 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 TLE1Q04724 770 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 HNF4GQ14541 408 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 SPATA46Q5T0L3 261 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 DIRC2Q96SL1 478 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 NDUFAF3Q9BU61 184 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 FAM166BA8MTA8 275 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 MLNRO43193 412 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 PAGE4O60829 102 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 KRASP01116 189 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 MDP1Q86V88 176 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 DTD1Q8TEA8 209 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 CIB3Q96Q77 187 aaPredicted RBP16.03■□□□□ 0.16
RTN4-201ENST00000317610 IER2Q9BTL4 223 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 OR2D2Q9H210 308 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 FUT9Q9Y231 359 aa16.03■□□□□ 0.16
RTN4-201ENST00000317610 NDUFB7P17568 137 aa16.02■□□□□ 0.16
RTN4-201ENST00000317610 NPPCP23582 126 aa16.02■□□□□ 0.16
RTN4-201ENST00000317610 IDH3GP51553 393 aaPredicted RBP16.02■□□□□ 0.16
RTN4-201ENST00000317610 BRWD1-AS2P59051 145 aa16.02■□□□□ 0.16
RTN4-201ENST00000317610 LCN2P80188 198 aa16.02■□□□□ 0.16
RTN4-201ENST00000317610 TMEM251Q8N6I4 163 aa16.02■□□□□ 0.16
RTN4-201ENST00000317610 OR1L1Q8NH94 360 aa16.02■□□□□ 0.16
RTN4-201ENST00000317610 NANOS1Q8WY41 292 aaKnown RBP16.02■□□□□ 0.16
RTN4-201ENST00000317610 KCNIP1Q9NZI2 227 aa16.02■□□□□ 0.16
RTN4-201ENST00000317610 TP53TG5Q9Y2B4 290 aa16.02■□□□□ 0.16
RTN4-201ENST00000317610 RAB29O14966 203 aa16.02■□□□□ 0.15
RTN4-201ENST00000317610 ZG16O60844 167 aa16.02■□□□□ 0.15
RTN4-201ENST00000317610 S1PR2O95136 353 aa16.02■□□□□ 0.15
RTN4-201ENST00000317610 NXPH2O95156 264 aa16.02■□□□□ 0.15
RTN4-201ENST00000317610 CER1O95813 267 aa16.02■□□□□ 0.15
RTN4-201ENST00000317610 ZXDAP98168 799 aa16.02■□□□□ 0.15
RTN4-201ENST00000317610 CATR1Q13166 79 aa16.02■□□□□ 0.15
RTN4-201ENST00000317610 TMEM249Q2WGJ8 235 aa16.02■□□□□ 0.15
RTN4-201ENST00000317610 Q3ZCU0 254 aa16.02■□□□□ 0.15
RTN4-201ENST00000317610 TMEM18Q96B42 140 aa16.02■□□□□ 0.15
RTN4-201ENST00000317610 TMEM30CPA0ZSE6 113 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 CLDN14O95500 239 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 CD99P14209 185 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 RAC2P15153 192 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 GNB2P62879 340 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 ZNF816Q0VGE8 651 aaPredicted RBP16.01■□□□□ 0.15
RTN4-201ENST00000317610 DMRTC2Q8IXT2 367 aaPredicted RBP16.01■□□□□ 0.15
RTN4-201ENST00000317610 TCTEX1D1Q8N7M0 179 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 MAFAQ8NHW3 353 aaPredicted RBP16.01■□□□□ 0.15
RTN4-201ENST00000317610 TMEM37Q8WXS4 190 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 GALMQ96C23 342 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 MISP3Q96FF7 219 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 TMPRSS2O15393 492 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 ST8SIA5O15466 376 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 CCKARP32238 428 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 CLEC12BQ2HXU8 276 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 ZNF766Q5HY98 468 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 ABHD17BQ5VST6 288 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 KCNIP4Q6PIL6 250 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 MCEMP1Q8IX19 187 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 Q8N7P7 452 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 ZNF709Q8N972 641 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 HES4Q9HCC6 221 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 LOXL2Q9Y4K0 774 aa16.01■□□□□ 0.15
RTN4-201ENST00000317610 C17orf98A8MV24 154 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms