RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 MS4A5Q9H3V2 200 aa16.58■□□□□ 0.25
TSR1-201ENST00000301364 FHITP49789 147 aa16.58■□□□□ 0.24
TSR1-201ENST00000301364 PSMG3Q9BT73 122 aaPredicted RBP16.58■□□□□ 0.24
TSR1-201ENST00000301364 SRD5A3Q9H8P0 318 aa16.58■□□□□ 0.24
TSR1-201ENST00000301364 PAFAH1B2P68402 229 aa16.58■□□□□ 0.24
TSR1-201ENST00000301364 IGHV3OR15-7A0A075B7D8 119 aa16.58■□□□□ 0.24
TSR1-201ENST00000301364 PPIHO43447 177 aaKnown RBP16.58■□□□□ 0.24
TSR1-201ENST00000301364 NDUFB4O95168 129 aa16.58■□□□□ 0.24
TSR1-201ENST00000301364 HIST3H3Q16695 136 aa16.58■□□□□ 0.24
TSR1-201ENST00000301364 Q6ZN92 141 aa16.58■□□□□ 0.24
TSR1-201ENST00000301364 SSX8Q7RTT4 187 aa16.58■□□□□ 0.24
TSR1-201ENST00000301364 OR1L1Q8NH94 360 aa16.58■□□□□ 0.24
TSR1-201ENST00000301364 SLC25A28Q96A46 364 aa16.58■□□□□ 0.24
TSR1-201ENST00000301364 RHOVQ96L33 236 aa16.58■□□□□ 0.24
TSR1-201ENST00000301364 NHLH1Q02575 133 aa16.57■□□□□ 0.24
TSR1-201ENST00000301364 MRPL13Q9BYD1 178 aaKnown RBP16.57■□□□□ 0.24
TSR1-201ENST00000301364 DICER1Q9UPY3 1922 aaKnown RBP16.57■□□□□ 0.24
TSR1-201ENST00000301364 TRAV34A0A0B4J273 112 aa16.57■□□□□ 0.24
TSR1-201ENST00000301364 hCG_38984A0A1B0GV85 526 aa16.57■□□□□ 0.24
TSR1-201ENST00000301364 PQLC2LA1A4F0 135 aa16.57■□□□□ 0.24
TSR1-201ENST00000301364 MT-ND6P03923 174 aa16.57■□□□□ 0.24
TSR1-201ENST00000301364 S100A4P26447 101 aaKnown RBP16.57■□□□□ 0.24
TSR1-201ENST00000301364 TMEM45BQ96B21 275 aa16.57■□□□□ 0.24
TSR1-201ENST00000301364 GPHA2Q96T91 129 aa16.57■□□□□ 0.24
TSR1-201ENST00000301364 PLSCR2Q9NRY7 297 aa16.57■□□□□ 0.24
TSR1-201ENST00000301364 MPZP25189 248 aa16.57■□□□□ 0.24
TSR1-201ENST00000301364 CDX1P47902 265 aaPredicted RBP16.57■□□□□ 0.24
TSR1-201ENST00000301364 LBHQ53QV2 105 aaPredicted RBP16.57■□□□□ 0.24
TSR1-201ENST00000301364 ARTNQ5T4W7 220 aa16.57■□□□□ 0.24
TSR1-201ENST00000301364 OR2V2Q96R30 315 aa16.57■□□□□ 0.24
TSR1-201ENST00000301364 GFI1Q99684 422 aa16.57■□□□□ 0.24
TSR1-201ENST00000301364 GSX1Q9H4S2 264 aaPredicted RBP16.57■□□□□ 0.24
TSR1-201ENST00000301364 SYNGR3O43761 229 aa16.56■□□□□ 0.24
TSR1-201ENST00000301364 LY6G6FQ5SQ64 297 aa16.56■□□□□ 0.24
TSR1-201ENST00000301364 COL8A1P27658 744 aa16.56■□□□□ 0.24
TSR1-201ENST00000301364 RPL31P62899 125 aaKnown RBP16.56■□□□□ 0.24
TSR1-201ENST00000301364 RAB1BQ9H0U4 201 aa16.56■□□□□ 0.24
TSR1-201ENST00000301364 K7N7A8 449 aa16.56■□□□□ 0.24
TSR1-201ENST00000301364 ISLRO14498 428 aa16.56■□□□□ 0.24
TSR1-201ENST00000301364 OR5AL1P0C617 328 aa16.56■□□□□ 0.24
TSR1-201ENST00000301364 MNX1P50219 401 aaPredicted RBP16.56■□□□□ 0.24
TSR1-201ENST00000301364 TREM2Q9NZC2 230 aa16.56■□□□□ 0.24
TSR1-201ENST00000301364 SMPD2O60906 423 aa16.56■□□□□ 0.24
TSR1-201ENST00000301364 NAT2P11245 290 aa16.56■□□□□ 0.24
TSR1-201ENST00000301364 MDKP21741 143 aaPredicted RBP16.56■□□□□ 0.24
TSR1-201ENST00000301364 ACP1P24666 158 aa16.56■□□□□ 0.24
TSR1-201ENST00000301364 GLIPR1P48060 266 aa16.56■□□□□ 0.24
TSR1-201ENST00000301364 STARD4Q96DR4 205 aa16.56■□□□□ 0.24
TSR1-201ENST00000301364 PRR33A8MZF0 331 aa16.55■□□□□ 0.24
TSR1-201ENST00000301364 NEURL1O76050 574 aa16.55■□□□□ 0.24
TSR1-201ENST00000301364 GCGP01275 180 aa16.55■□□□□ 0.24
TSR1-201ENST00000301364 NRN1LQ496H8 165 aa16.55■□□□□ 0.24
TSR1-201ENST00000301364 AHRRA9YTQ3 701 aa16.55■□□□□ 0.24
TSR1-201ENST00000301364 ZNF506Q5JVG8 444 aa16.55■□□□□ 0.24
TSR1-201ENST00000301364 INSIG2Q9Y5U4 225 aa16.55■□□□□ 0.24
TSR1-201ENST00000301364 IGLV3-12A0A075B6K2 115 aa16.55■□□□□ 0.24
TSR1-201ENST00000301364 LOC105371267A0A1B0GV96 52 aa16.55■□□□□ 0.24
TSR1-201ENST00000301364 WDFY1Q8IWB7 410 aa16.55■□□□□ 0.24
TSR1-201ENST00000301364 FADS6Q8N9I5 356 aa16.55■□□□□ 0.24
TSR1-201ENST00000301364 METTL1Q9UBP6 276 aaKnown RBP16.55■□□□□ 0.24
TSR1-201ENST00000301364 ZSWIM8A7E2V4 1837 aa16.55■□□□□ 0.24
TSR1-201ENST00000301364 APCSP02743 223 aa16.55■□□□□ 0.24
TSR1-201ENST00000301364 SBF1O95248 1867 aa16.55■□□□□ 0.24
TSR1-201ENST00000301364 C16orf97H3BN30 126 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 EIF3GO75821 320 aaKnown RBP eCLIP16.54■□□□□ 0.247e-7■■■■□ 22.8
TSR1-201ENST00000301364 PTGDSP41222 190 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 RIGQ13278 110 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 ZNF826PQ6ZT77 177 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 OR5P3Q8WZ94 311 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 PCGF1Q9BSM1 259 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 BRS3P32247 399 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 RASL11BQ9BPW5 248 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 TGIF2-C20orf24A0A0A6YYL0 155 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 ODAMA1E959 279 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 ACAA1P09110 424 aaPredicted RBP16.54■□□□□ 0.24
TSR1-201ENST00000301364 UCP1P25874 307 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 PQLC2Q6ZP29 291 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 OR1P1Q8NH06 330 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 TCAPO15273 167 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 FOXC1Q12948 553 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 MEGF10Q96KG7 1140 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 DIRC2Q96SL1 478 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 SLC25A10Q9UBX3 287 aaPredicted RBP16.54■□□□□ 0.24
TSR1-201ENST00000301364 DNAJC13O75165 2243 aa16.54■□□□□ 0.24
TSR1-201ENST00000301364 A0A1W2PPE3 182 aa16.53■□□□□ 0.24
TSR1-201ENST00000301364 MARCH11A6NNE9 402 aa16.53■□□□□ 0.24
TSR1-201ENST00000301364 ZNF735P0CB33 412 aa16.53■□□□□ 0.24
TSR1-201ENST00000301364 SMIM17P0DL12 118 aa16.53■□□□□ 0.24
TSR1-201ENST00000301364 PPP1R32Q7Z5V6 425 aa16.53■□□□□ 0.24
TSR1-201ENST00000301364 LOXL4Q96JB6 756 aa16.53■□□□□ 0.24
TSR1-201ENST00000301364 DOCK6Q96HP0 2047 aa16.53■□□□□ 0.24
TSR1-201ENST00000301364 A0A087WV48 116 aa16.53■□□□□ 0.24
TSR1-201ENST00000301364 TMEM250H0YL14 139 aa16.53■□□□□ 0.24
TSR1-201ENST00000301364 ZNHIT1O43257 154 aa16.53■□□□□ 0.24
TSR1-201ENST00000301364 GNG7O60262 68 aa16.53■□□□□ 0.24
TSR1-201ENST00000301364 SELENOTP62341 195 aa16.53■□□□□ 0.24
TSR1-201ENST00000301364 PAXXQ9BUH6 204 aa16.53■□□□□ 0.24
TSR1-201ENST00000301364 PPIAL4EA0A075B759 164 aa16.53■□□□□ 0.24
TSR1-201ENST00000301364 PPIAL4DF5H284 164 aa16.53■□□□□ 0.24
TSR1-201ENST00000301364 PPIAL4FP0DN26 164 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms